RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TNFSF4P23510 183 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF474Q6S9Z5 364 aaPredicted RBP10.54□□□□□ -0.72
C9orf3-201ENST00000277198 LYG1Q8N1E2 194 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 OR5B3Q8NH48 314 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 NDUFAF3Q9BU61 184 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 PRO1933Q9H354 126 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 PLEKHA3Q9HB20 300 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 ANKHD1Q8IWZ3 2542 aaKnown RBP10.54□□□□□ -0.72
C9orf3-201ENST00000277198 TRBV9A0A0B4J1U6 114 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 J3QR06 171 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 UPK2O00526 184 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 OR10J4P0C629 311 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 C2orf83Q53S99 150 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 PQLC2Q6ZP29 291 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF788Q6ZQV5 615 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 SLC25A48Q6ZT89 311 aaKnown RBP10.54□□□□□ -0.72
C9orf3-201ENST00000277198 HRNRQ86YZ3 2850 aaPredicted RBP10.54□□□□□ -0.72
C9orf3-201ENST00000277198 AKAP9Q99996 3911 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 C2orf88Q9BSF0 95 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 BET1LQ9NYM9 111 aa10.54□□□□□ -0.72
C9orf3-201ENST00000277198 CREBBPQ92793 2442 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 LINC00869P0C866 280 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 ESDP10768 282 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 PAFAH1B2P68402 229 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 TNFAIP6P98066 277 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-201ENST00000277198 COX19Q49B96 90 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 SPRNQ5BIV9 151 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 TEX36Q5VZQ5 186 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 OR1L8Q8NGR8 309 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 EAF1Q96JC9 268 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-201ENST00000277198 GAFA1Q96PS6 74 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-201ENST00000277198 TECRQ9NZ01 308 aaKnown RBP10.53□□□□□ -0.72
C9orf3-201ENST00000277198 RPUSD1Q9UJJ7 312 aaKnown RBP10.53□□□□□ -0.72
C9orf3-201ENST00000277198 SPG11Q96JI7 2443 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 DOCK11Q5JSL3 2073 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 OTOGQ6ZRI0 2925 aa10.53□□□□□ -0.72
C9orf3-201ENST00000277198 hADV38S2A0JD32 116 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 PGPEP1LA6NFU8 196 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF705GA8MUZ8 300 aaPredicted RBP10.52□□□□□ -0.72
C9orf3-201ENST00000277198 INS-IGF2F8WCM5 200 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 IGHV3-7P01780 117 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 TAS2R45P59539 299 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 ZNF90Q03938 601 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 TCF23Q7RTU1 214 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 OR4P4Q8NGL7 312 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 CACNG8Q8WXS5 425 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 MYO9AB2RTY4 2548 aa10.52□□□□□ -0.72
C9orf3-201ENST00000277198 CCDC168Q8NDH2 2452 aa10.52□□□□□ -0.73
C9orf3-201ENST00000277198 AKAP6Q13023 2319 aa10.52□□□□□ -0.73
C9orf3-201ENST00000277198 IGHV1-46P01743 117 aa10.52□□□□□ -0.73
C9orf3-201ENST00000277198 DMRTC2Q8IXT2 367 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-201ENST00000277198 OSR1Q8TAX0 266 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-201ENST00000277198 RNF2Q99496 336 aa10.52□□□□□ -0.73
C9orf3-201ENST00000277198 SPOCK3Q9BQ16 436 aa10.52□□□□□ -0.73
C9orf3-201ENST00000277198 LINC00312Q9Y6C7 94 aa10.52□□□□□ -0.73
C9orf3-201ENST00000277198 CT45A6P0DMU7 189 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 CT45A5P0DMU8 189 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 CT45A7P0DMV0 189 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 IRF2P14316 349 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 RAB4BP61018 213 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 MEF2CQ06413 473 aaPredicted RBP10.51□□□□□ -0.73
C9orf3-201ENST00000277198 SPATA31B1PQ5VZV4 182 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 NUP37Q8NFH4 326 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 LEAP2Q969E1 77 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 NABP2Q9BQ15 211 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 SLC35D1Q9NTN3 355 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
C9orf3-201ENST00000277198 A0A1W2PRE2 83 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 HELTA6NFD8 242 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 K7EN84 100 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 OR5G3P0C626 314 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 SELLP14151 372 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 OR10J1P30954 320 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 LGALS4P56470 323 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 TAS2R60P59551 318 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 RANP62826 216 aaKnown RBP10.5□□□□□ -0.73
C9orf3-201ENST00000277198 RPEL1Q2QD12 228 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 ZNF833PQ6ZTB9 187 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 MRPL32Q9BYC8 188 aaKnown RBP10.5□□□□□ -0.73
C9orf3-201ENST00000277198 GAL3ST2Q9H3Q3 398 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 FOXH1O75593 365 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 MT-ND6P03923 174 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 OR4A8P0C604 315 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 ADMP35318 185 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 GNG4P50150 75 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 Q0VG73 95 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 PSG5Q15238 335 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 PRSS8Q16651 343 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 UTF1Q5T230 341 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 VHLLQ6RSH7 139 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 MIR17HGQ75NE6 70 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 MS4A10Q96PG2 267 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 GNB1LQ9BYB4 327 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 OSTCQ9NRP0 149 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 JKAMPQ9P055 326 aa10.5□□□□□ -0.73
C9orf3-201ENST00000277198 TEX50A0A1B0GTY4 177 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 TNFRSF1AP19438 455 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 TPPP2P59282 170 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms