RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 NPIPB11E5RHQ5 1161 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 TGOLN2O43493 480 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 CSN3P07498 182 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 LMO1P25800 156 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 TMEM167BQ9NRX6 74 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 TNRC6AQ8NDV7 1962 aaKnown RBP10.3□□□□□ -0.76
UBXN4-201ENST00000272638 A0A1W2PN81 502 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 PYY3Q5JQD4 70 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 OR2D3Q8NGH3 330 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 PAM16Q9Y3D7 125 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 TIMM9Q9Y5J7 89 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 C15orf65H3BRN8 121 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 UBE2CO00762 179 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 GATCO43716 136 aaKnown RBP10.3□□□□□ -0.76
UBXN4-201ENST00000272638 PRRX1P54821 245 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 MFAP2P55001 183 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 ADIPOQQ15848 244 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 PIP4P1Q86T03 277 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 PDPNQ86YL7 162 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 GAFA1Q96PS6 74 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 PGPA6NDG6 321 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 CDPF1Q6NVV7 123 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 OR1L4Q8NGR5 311 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 AGMATQ9BSE5 352 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 OR51M1Q9H341 326 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 TNFRSF19Q9NS68 423 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 PPIAL4CA0A0B4J2A2 164 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 PPIAL4GP0DN37 164 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 LYPD6BQ8NI32 183 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 RPUSD1Q9UJJ7 312 aaKnown RBP10.3□□□□□ -0.76
UBXN4-201ENST00000272638 RAXQ9Y2V3 346 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 WASHC3Q9Y3C0 194 aa10.3□□□□□ -0.76
UBXN4-201ENST00000272638 IGHV3-23P01764 117 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 Q56UQ5 140 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 TMEM200BQ69YZ2 307 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 C1orf174Q8IYL3 243 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 ZNF295-AS1Q8N0V1 137 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 VN1R17PQ8TDU5 208 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 MYO18BQ8IUG5 2567 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 ASPMQ8IZT6 3477 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 MYO9AB2RTY4 2548 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 G0S2P27469 103 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 GNG5P63218 68 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 ARSJQ5FYB0 599 aaPredicted RBP10.29□□□□□ -0.76
UBXN4-201ENST00000272638 RNASEKQ6P5S7 137 aaKnown RBP10.29□□□□□ -0.76
UBXN4-201ENST00000272638 RNASE6Q93091 150 aaKnown RBP10.29□□□□□ -0.76
UBXN4-201ENST00000272638 BORCS7Q96B45 105 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 LINC00479Q96M42 142 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 UBTD1Q9HAC8 227 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 DNAJC4Q9NNZ3 241 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 IGHV3OR16-13A0A075B7E8 117 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 A0A087WWC5 75 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 ELOA3CA0A087WX78 387 aaPredicted RBP10.29□□□□□ -0.76
UBXN4-201ENST00000272638 IGHV3-74A0A0B4J1X5 117 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 TEX50A0A1B0GTY4 177 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 UPK2O00526 184 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 HSBP1O75506 76 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 COL4A2P08572 1712 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 TIMP3P35625 211 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 ZNF114Q8NC26 417 aa10.29□□□□□ -0.76
UBXN4-201ENST00000272638 IGHV3OR16-10A0A075B7F0 116 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 C8orf88P0DMB2 117 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 PAX5Q02548 391 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 SERTM2A0A1B0GWG4 89 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 SRRM4A7MD48 611 aaKnown RBP10.28□□□□□ -0.76
UBXN4-201ENST00000272638 WNT2P09544 360 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 MMD2Q8IY49 270 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 YTHDF2Q9Y5A9 579 aaKnown RBP10.28□□□□□ -0.76
UBXN4-201ENST00000272638 TRAV1-1A0A0B4J248 108 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 IGLV1-44P01699 117 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 C17orf58Q2M2W7 97 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 IBA57Q5T440 356 aaKnown RBP10.28□□□□□ -0.76
UBXN4-201ENST00000272638 KDF1Q8NAX2 398 aaPredicted RBP10.28□□□□□ -0.76
UBXN4-201ENST00000272638 TXN2Q99757 166 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 ASCL2Q99929 193 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 HSPB9Q9BQS6 159 aa10.28□□□□□ -0.76
UBXN4-201ENST00000272638 MRPL18Q9H0U6 180 aaKnown RBP10.28□□□□□ -0.76
UBXN4-201ENST00000272638 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.76
UBXN4-201ENST00000272638 PROP1O75360 226 aa10.27□□□□□ -0.76
UBXN4-201ENST00000272638 USF1P22415 310 aaPredicted RBP10.27□□□□□ -0.76
UBXN4-201ENST00000272638 OR8B3Q8NGG8 313 aa10.27□□□□□ -0.76
UBXN4-201ENST00000272638 OR8B2Q96RD0 313 aa10.27□□□□□ -0.76
UBXN4-201ENST00000272638 SEBOXQ9HB31 216 aaPredicted RBP10.27□□□□□ -0.76
UBXN4-201ENST00000272638 AMMECR1Q9Y4X0 333 aaPredicted RBP10.27□□□□□ -0.76
UBXN4-201ENST00000272638 LINC00312Q9Y6C7 94 aa10.27□□□□□ -0.76
UBXN4-201ENST00000272638 TNRC18O15417 2968 aaPredicted RBP10.27□□□□□ -0.77
UBXN4-201ENST00000272638 DLL1O00548 723 aa10.27□□□□□ -0.77
UBXN4-201ENST00000272638 TM4SF5O14894 197 aa10.27□□□□□ -0.77
UBXN4-201ENST00000272638 HIST1H1BP16401 226 aaKnown RBP10.27□□□□□ -0.77
UBXN4-201ENST00000272638 RPL11P62913 178 aaKnown RBP10.27□□□□□ -0.77
UBXN4-201ENST00000272638 LINC01551Q86U37 167 aa10.27□□□□□ -0.77
UBXN4-201ENST00000272638 ZNF430Q9H8G1 570 aaPredicted RBP10.27□□□□□ -0.77
UBXN4-201ENST00000272638 CHEK1O14757 476 aa10.27□□□□□ -0.77
UBXN4-201ENST00000272638 BRWD1-AS2P59051 145 aa10.27□□□□□ -0.77
UBXN4-201ENST00000272638 LINC00305Q7Z4B0 112 aa10.27□□□□□ -0.77
UBXN4-201ENST00000272638 FOLR2P14207 255 aa10.26□□□□□ -0.77
UBXN4-201ENST00000272638 RAB4AP20338 218 aa10.26□□□□□ -0.77
UBXN4-201ENST00000272638 ZNF788Q6ZQV5 615 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms