RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 REG1BP48304 166 aa13.78□□□□□ -0.2
RTN1-201ENST00000267484 IBA57Q5T440 356 aaKnown RBP13.78□□□□□ -0.2
RTN1-201ENST00000267484 C1orf162Q8NEQ5 155 aaPredicted RBP13.78□□□□□ -0.2
RTN1-201ENST00000267484 TECRQ9NZ01 308 aaKnown RBP13.78□□□□□ -0.2
RTN1-201ENST00000267484 GVINP1Q7Z2Y8 2422 aa13.78□□□□□ -0.2
RTN1-201ENST00000267484 TEX50A0A1B0GTY4 177 aa13.77□□□□□ -0.2
RTN1-201ENST00000267484 BMPR1BO00238 502 aa13.77□□□□□ -0.2
RTN1-201ENST00000267484 SP9P0CG40 484 aa13.77□□□□□ -0.2
RTN1-201ENST00000267484 CT45A6P0DMU7 189 aa13.77□□□□□ -0.2
RTN1-201ENST00000267484 CT45A5P0DMU8 189 aa13.77□□□□□ -0.2
RTN1-201ENST00000267484 CT45A7P0DMV0 189 aa13.77□□□□□ -0.2
RTN1-201ENST00000267484 SGK494Q96LW2 274 aa13.77□□□□□ -0.2
RTN1-201ENST00000267484 TMEM68Q96MH6 324 aa13.77□□□□□ -0.2
RTN1-201ENST00000267484 E7EUB6 86 aa13.77□□□□□ -0.21
RTN1-201ENST00000267484 PYYP10082 97 aa13.77□□□□□ -0.21
RTN1-201ENST00000267484 SEM1Q6ZVN7 128 aa13.77□□□□□ -0.21
RTN1-201ENST00000267484 CHODLQ9H9P2 273 aa13.77□□□□□ -0.21
RTN1-201ENST00000267484 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.21
RTN1-201ENST00000267484 TRAV9-1A0A075B6T8 112 aa13.77□□□□□ -0.21
RTN1-201ENST00000267484 LPAR2Q9HBW0 351 aa13.77□□□□□ -0.21
RTN1-201ENST00000267484 TMEM167BQ9NRX6 74 aa13.77□□□□□ -0.21
RTN1-201ENST00000267484 ZNF586Q9NXT0 402 aa13.77□□□□□ -0.21
RTN1-201ENST00000267484 PLAUP00749 431 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 KLF3P57682 345 aaPredicted RBP13.76□□□□□ -0.21
RTN1-201ENST00000267484 MAJINQ3KP22 176 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 CDC42EP3Q9UKI2 254 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 UPK2O00526 184 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 LHBP01229 141 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 SAA1P0DJI8 122 aaPredicted RBP13.76□□□□□ -0.21
RTN1-201ENST00000267484 PRCDQ00LT1 54 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 MMDQ15546 238 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 LY96Q9Y6Y9 160 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 PCNX1Q96RV3 2341 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 DLEU1O43261 78 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 MZT1Q08AG7 82 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 SLAQ13239 276 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 C22orf34Q6ZV56 151 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 ZNF439Q8NDP4 499 aa13.76□□□□□ -0.21
RTN1-201ENST00000267484 SLC25A10Q9UBX3 287 aaPredicted RBP13.76□□□□□ -0.21
RTN1-201ENST00000267484 RAI1Q7Z5J4 1906 aaPredicted RBP13.75□□□□□ -0.21
RTN1-201ENST00000267484 CHRNB4P30926 498 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 SPATA45Q537H7 98 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 LCN12Q6JVE5 192 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 PRR27Q6MZM9 219 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 SARAFQ96BY9 339 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 TANC2Q9HCD6 1990 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 A0A1B0GWJ7 208 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 C10orf55Q5SWW7 151 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 ZCCHC24Q8N2G6 241 aaKnown RBP13.75□□□□□ -0.21
RTN1-201ENST00000267484 ZNF355PQ9NSJ1 428 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 PRNDQ9UKY0 176 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 GOLT1BQ9Y3E0 138 aa13.75□□□□□ -0.21
RTN1-201ENST00000267484 UBE2L3P68036 154 aaKnown RBP13.74□□□□□ -0.21
RTN1-201ENST00000267484 OSTCQ9NRP0 149 aa13.74□□□□□ -0.21
RTN1-201ENST00000267484 KALRNO60229 2985 aa13.74□□□□□ -0.21
RTN1-201ENST00000267484 RNASE2P10153 161 aaKnown RBP13.74□□□□□ -0.21
RTN1-201ENST00000267484 ZNF474Q6S9Z5 364 aaPredicted RBP13.74□□□□□ -0.21
RTN1-201ENST00000267484 CORO2AQ92828 525 aa13.74□□□□□ -0.21
RTN1-201ENST00000267484 KCNS1Q96KK3 526 aa13.74□□□□□ -0.21
RTN1-201ENST00000267484 IGF2BP2-AS1Q96M15 143 aa13.74□□□□□ -0.21
RTN1-201ENST00000267484 SLC25A33Q9BSK2 321 aa13.74□□□□□ -0.21
RTN1-201ENST00000267484 C3orf79P0CE67 100 aa13.74□□□□□ -0.21
RTN1-201ENST00000267484 GPR6P46095 362 aaPredicted RBP13.74□□□□□ -0.21
RTN1-201ENST00000267484 GAFA1Q96PS6 74 aa13.74□□□□□ -0.21
RTN1-201ENST00000267484 USF1P22415 310 aaPredicted RBP13.73□□□□□ -0.21
RTN1-201ENST00000267484 SSBP4Q9BWG4 385 aaPredicted RBP13.73□□□□□ -0.21
RTN1-201ENST00000267484 SLC25A2Q9BXI2 301 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 M0QZK8 103 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 AMY1AP04745 511 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 OR5G3P0C626 314 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 C8orf88P0DMB2 117 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 CFHR2P36980 270 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 PPOXP50336 477 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 NIT1Q86X76 327 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 MRPL20Q9BYC9 149 aaKnown RBP13.73□□□□□ -0.21
RTN1-201ENST00000267484 TRBV9A0A0B4J1U6 114 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 PLA2G2CQ5R387 149 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 TSKUQ8WUA8 353 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 FAM167A-AS1Q96KT0 104 aa13.73□□□□□ -0.21
RTN1-201ENST00000267484 ISLRO14498 428 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 ZNF324O75467 553 aaPredicted RBP13.72□□□□□ -0.21
RTN1-201ENST00000267484 APCSP02743 223 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 GNG5P63218 68 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 DIAPH2-AS1Q14236 149 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 WDR73Q6P4I2 378 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 C1orf174Q8IYL3 243 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 RNF2Q99496 336 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 TUBG2Q9NRH3 451 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 RNF7Q9UBF6 113 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 CCL3L1P16619 93 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 TNFAIP6P98066 277 aaPredicted RBP13.72□□□□□ -0.21
RTN1-201ENST00000267484 GDF5OSQ5U4N7 250 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 DEFB123Q8N688 67 aa13.72□□□□□ -0.21
RTN1-201ENST00000267484 A0A1W2PN81 502 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 TAS2R45P59539 299 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 CD69Q07108 199 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 RTL8BQ17RB0 113 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 SMIM27A0A1W2PRY6 76 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 CORTO00230 105 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 MFAP2P55001 183 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms