RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 REG1AP05451 166 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 PTGDSP41222 190 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 LYRM7Q5U5X0 104 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 ZNRF1Q8ND25 227 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 MYOZ3Q8TDC0 251 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 IGHV3-72A0A0B4J1Y9 119 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 TRAV8-6A0A0B4J262 113 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 LGALS4P56470 323 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 GNG5P63218 68 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 FADS6Q8N9I5 356 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 ZNF784Q8NCA9 323 aaPredicted RBP12.6□□□□□ -0.39
CASC3-201ENST00000264645 CHRNA10Q9GZZ6 450 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 MED13LQ71F56 2210 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 DOPEY2Q9Y3R5 2298 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 PYYP10082 97 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 LHX2P50458 406 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 TEX43Q6ZNM6 134 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 LINC00305Q7Z4B0 112 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 KLF14Q8TD94 323 aaPredicted RBP12.6□□□□□ -0.39
CASC3-201ENST00000264645 F2Z2F3 143 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 CCL25O15444 150 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 NBEAP1P0C6P0 100 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 Q0VG73 95 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 C5orf30Q96GV9 206 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 GTSF1LQ9H1H1 148 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 HIGD1AQ9Y241 93 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 EP400Q96L91 3159 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 HOXA4Q00056 320 aaPredicted RBP12.59□□□□□ -0.39
CASC3-201ENST00000264645 CT55Q8WUE5 264 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 A0A1B0GWB2 263 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 KIR2DL2P43627 348 aaPredicted RBP12.59□□□□□ -0.39
CASC3-201ENST00000264645 LRRC10Q5BKY1 277 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 MRPL32Q9BYC8 188 aaKnown RBP12.59□□□□□ -0.39
CASC3-201ENST00000264645 JPT1Q9UK76 154 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
CASC3-201ENST00000264645 TMEM189A5PLL7 270 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 SLC25A17O43808 307 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 ZNF146Q15072 292 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 HES7Q9BYE0 225 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 RPP21Q9H633 154 aaKnown RBP12.58□□□□□ -0.4
CASC3-201ENST00000264645 ZNF257Q9Y2Q1 563 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 A0A0G2JMM0 328 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 A0A1W2PPB8 328 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 KIR3DP1A8MWS1 328 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 LINC00271P0C7V0 271 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 TNFRSF1AP19438 455 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 ZNF585BQ52M93 769 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 C1orf185Q5T7R7 199 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 ZNF497Q6ZNH5 498 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 CCL13Q99616 98 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 A0A1W2PQM1 296 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 COX7A1P24310 79 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 YPEL3P61236 119 aaPredicted RBP12.58□□□□□ -0.4
CASC3-201ENST00000264645 SIGMAR1Q99720 223 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 TTTY12Q9BZ98 90 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 CRISPLD2Q9H0B8 497 aa12.58□□□□□ -0.4
CASC3-201ENST00000264645 LYPD6Q86Y78 171 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 PYGO2Q9BRQ0 406 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 CACNA1BQ00975 2339 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 C9JCJ5 164 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 PEAR1Q5VY43 1037 aaPredicted RBP12.57□□□□□ -0.4
CASC3-201ENST00000264645 INO80CQ6PI98 192 aaPredicted RBP12.57□□□□□ -0.4
CASC3-201ENST00000264645 TMEM144Q7Z5S9 345 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 MGST2Q99735 147 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 NCOA6Q14686 2063 aaPredicted RBP12.57□□□□□ -0.4
CASC3-201ENST00000264645 NCBP2LA6PVI3 153 aaKnown RBP12.57□□□□□ -0.4
CASC3-201ENST00000264645 COX6A1P12074 109 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 ZNF138P52744 262 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 FOXG1P55316 489 aaPredicted RBP12.57□□□□□ -0.4
CASC3-201ENST00000264645 MBNL2Q5VZF2 373 aaKnown RBP12.57□□□□□ -0.4
CASC3-201ENST00000264645 TMEM42Q69YG0 159 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 HAPLN4Q86UW8 402 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 OR9G1Q8NH87 305 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 ZNF502Q8TBZ5 544 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 RPEQ96AT9 228 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 GPR82Q96P67 336 aa12.57□□□□□ -0.4
CASC3-201ENST00000264645 NDUFS8O00217 210 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 NTF4P34130 210 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 IFI27L2Q9H2X8 130 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 NHP2Q9NX24 153 aaKnown RBP12.56□□□□□ -0.4
CASC3-201ENST00000264645 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 PCNX1Q96RV3 2341 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 RBPMS2Q6ZRY4 209 aaKnown RBP12.56□□□□□ -0.4
CASC3-201ENST00000264645 CHODLQ9H9P2 273 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 RNF7Q9UBF6 113 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 TRAV5A0A0B4J249 113 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 A0A1W2PR77 199 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 IGLL1P15814 213 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 SEC11AP67812 179 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 IGHV2OR16-5A0A0B4J2B6 119 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 SH2D7A6NKC9 451 aaPredicted RBP12.56□□□□□ -0.4
CASC3-201ENST00000264645 CELA3AP09093 270 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 TMEM108Q6UXF1 575 aa12.56□□□□□ -0.4
CASC3-201ENST00000264645 BHLHA15Q7RTS1 189 aaPredicted RBP12.56□□□□□ -0.4
CASC3-201ENST00000264645 TMEM160Q9NX00 188 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 PLXNA4Q9HCM2 1894 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 DENND4CQ5VZ89 1909 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 WDR87Q6ZQQ6 2873 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 PRB4P10163 310 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms