RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 MRPS16Q9Y3D3 137 aaKnown RBP6.84□□□□□ -1.31
PTPN3-201ENST00000262539 SPTAN1Q13813 2472 aaKnown RBP6.84□□□□□ -1.31
PTPN3-201ENST00000262539 NPPCP23582 126 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 GPX4P36969 197 aaPredicted RBP6.84□□□□□ -1.31
PTPN3-201ENST00000262539 PSG9Q00887 426 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 ZNF826PQ6ZT77 177 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 RNF126Q9BV68 326 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 HSPB8Q9UJY1 196 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 IGKV1D-8A0A087WSZ0 117 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 MPTX1A8MV57 137 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 ATP6V0CP27449 155 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 OR13A1Q8NGR1 328 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 C8orf46Q8TAG6 207 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 GLIPR1P48060 266 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 SUMO2P61956 95 aaKnown RBP6.84□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM249Q2WGJ8 235 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM14EPQ6UXP3 125 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 OR2T10Q8NGZ9 312 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 GEMIN7Q9H840 131 aaKnown RBP6.84□□□□□ -1.31
PTPN3-201ENST00000262539 NUP210LQ5VU65 1888 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 CRPP02741 224 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 WT1P19544 449 aaPredicted RBP6.84□□□□□ -1.31
PTPN3-201ENST00000262539 DUTP33316 252 aaKnown RBP6.84□□□□□ -1.31
PTPN3-201ENST00000262539 B2MP61769 119 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 FXYD3Q14802 87 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 UNQ6494/PRO21346Q6UXR6 183 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 LEAP2Q969E1 77 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 TP53RKQ96S44 253 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 TCF19Q9Y242 345 aa6.84□□□□□ -1.31
PTPN3-201ENST00000262539 DPRXA6NFQ7 191 aa6.84□□□□□ -1.32
PTPN3-201ENST00000262539 CXorf1O96002 111 aa6.84□□□□□ -1.32
PTPN3-201ENST00000262539 APCSP02743 223 aa6.84□□□□□ -1.32
PTPN3-201ENST00000262539 LGALS3P17931 250 aaKnown RBP6.84□□□□□ -1.32
PTPN3-201ENST00000262539 ANOS1P23352 680 aa6.84□□□□□ -1.32
PTPN3-201ENST00000262539 CFAP161Q6P656 301 aa6.84□□□□□ -1.32
PTPN3-201ENST00000262539 ALKBH7Q9BT30 221 aaPredicted RBP6.84□□□□□ -1.32
PTPN3-201ENST00000262539 C5orf63A6NC05 138 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF415Q09FC8 603 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 WDFY1Q8IWB7 410 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 WDR83OSQ9Y284 106 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 CDX1P47902 265 aaPredicted RBP6.83□□□□□ -1.32
PTPN3-201ENST00000262539 CIRBPQ14011 172 aaKnown RBP6.83□□□□□ -1.32
PTPN3-201ENST00000262539 MORN2Q502X0 79 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 FAM159AQ6UWV7 190 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF256Q9Y2P7 627 aaPredicted RBP6.83□□□□□ -1.32
PTPN3-201ENST00000262539 H0YIZ8 118 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 RPL8P62917 257 aaKnown RBP6.83□□□□□ -1.32
PTPN3-201ENST00000262539 BSPH1Q075Z2 132 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 LRP11Q86VZ4 500 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 TEX45Q8NA69 505 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 MBD3L1Q8WWY6 194 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 COQ2Q96H96 371 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 IGHV3-35A0A0C4DH35 117 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 NDUFS8O00217 210 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 CELA3BP08861 270 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 FBLL1A6NHQ2 334 aaKnown RBP6.83□□□□□ -1.32
PTPN3-201ENST00000262539 INS-IGF2F8WCM5 200 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 M0R1W7 72 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 TMEM177Q53S58 311 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 TAF15Q92804 592 aaKnown RBP eCLIP6.83□□□□□ -1.32
PTPN3-201ENST00000262539 OR5AC2Q9NZP5 309 aa6.83□□□□□ -1.32
PTPN3-201ENST00000262539 RTTNQ86VV8 2226 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 IGHV3-49A0A0A0MS15 119 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 A0A0G2JNJ9 132 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 RPL29P47914 159 aaKnown RBP6.82□□□□□ -1.32
PTPN3-201ENST00000262539 TMEM167AQ8TBQ9 72 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 RNASEH2CQ8TDP1 164 aaKnown RBP6.82□□□□□ -1.32
PTPN3-201ENST00000262539 COPS9Q8WXC6 57 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 Q9UFV3 132 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 VAX2Q9UIW0 290 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 MED12Q93074 2177 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 TRAV30A0A087WSZ9 112 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 PSPNO60542 156 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 SLC25A48Q6ZT89 311 aaKnown RBP6.82□□□□□ -1.32
PTPN3-201ENST00000262539 IGHV3OR16-13A0A075B7E8 117 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 IGHV3-74A0A0B4J1X5 117 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 FAM74A7A6NL05 159 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 IGHV2-70P01814 119 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 MINOS1Q5TGZ0 78 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 OR10G8Q8NGN5 311 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 MRPL32Q9BYC8 188 aaKnown RBP6.82□□□□□ -1.32
PTPN3-201ENST00000262539 MINOS1-NBL1R4GNA1 71 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 TMEM178BH3BS89 294 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 STAG3L2P0CL84 134 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 NMUP48645 174 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 RND2P52198 227 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF506Q5JVG8 444 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 Q6ZR03 302 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 KIR3DL3Q8N743 410 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 NPFFR1Q9GZQ6 430 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 DPM3Q9P2X0 92 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 TMEM191AQ9H0A3 160 aa6.82□□□□□ -1.32
PTPN3-201ENST00000262539 IGKV1D-13A0A0B4J2D9 117 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 IFITM10A6NMD0 228 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 VENTXO95231 258 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF688P0C7X2 276 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 IGKV1-13P0DP09 117 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 TNFRSF18Q9Y5U5 241 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 CLDN34H7C241 214 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms