RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 LINC00312Q9Y6C7 94 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 C1QTNF9BB2RNN3 333 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 C1QTNF9P0C862 333 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 RPL35AP18077 110 aaKnown RBP10.16□□□□□ -0.78
SPG11-201ENST00000261866 PEMTQ9UBM1 199 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 POLEQ07864 2286 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 LOC285556D6RIA3 1793 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 TM4SF5O14894 197 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 ASIPP42127 132 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 KLHDC3Q9BQ90 382 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 NYNRINQ9P2P1 1898 aaKnown RBP10.16□□□□□ -0.78
SPG11-201ENST00000261866 CD55P08174 381 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 ZNF385CQ66K41 422 aaPredicted RBP10.16□□□□□ -0.78
SPG11-201ENST00000261866 KCNS1Q96KK3 526 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 PQLC2LA1A4F0 135 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 RHOGP84095 191 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 RTN4RL2Q86UN3 420 aa10.16□□□□□ -0.78
SPG11-201ENST00000261866 CD7P09564 240 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 NBEAP1P0C6P0 100 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 ALX4Q9H161 411 aaPredicted RBP10.15□□□□□ -0.78
SPG11-201ENST00000261866 OR10W1Q8NGF6 305 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 CHRNA10Q9GZZ6 450 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 ZNF319Q9P2F9 582 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 GREB1Q4ZG55 1949 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 IGKV1D-13A0A0B4J2D9 117 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 IGKV1-13P0DP09 117 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 EVI2AP22794 236 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 LAIR2Q6ISS4 152 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 CACNA1IQ9P0X4 2223 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 OR11H4Q8NGC9 324 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 TMEM133Q9H2Q1 129 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 NPIPB9F8W1W9 429 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 ATP5G3P48201 142 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 C2orf88Q9BSF0 95 aa10.15□□□□□ -0.78
SPG11-201ENST00000261866 DOCK7Q96N67 2140 aa10.15□□□□□ -0.79
SPG11-201ENST00000261866 AGAP20933 346 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 ZNF329Q86UD4 541 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 TRPM7Q96QT4 1865 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 PSCAO43653 123 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 C14orf144Q96I85 54 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 TXNDC17Q9BRA2 123 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 IGHV3-53P01767 116 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 CRIPAKQ8N1N5 446 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 IMMP2LQ96T52 175 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 CBLN1P23435 193 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 GTSCR1Q86UQ5 136 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 OSR1Q8TAX0 266 aaPredicted RBP10.14□□□□□ -0.79
SPG11-201ENST00000261866 EFNA2O43921 213 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 C2orf68Q2NKX9 166 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 NXT2Q9NPJ8 142 aaKnown RBP10.14□□□□□ -0.79
SPG11-201ENST00000261866 CRIM1Q9NZV1 1036 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 LOC102723996A0A087X1L8 192 aa10.14□□□□□ -0.79
SPG11-201ENST00000261866 RTBDNQ9BSG5 229 aaPredicted RBP10.14□□□□□ -0.79
SPG11-201ENST00000261866 PARD6GQ9BYG4 376 aaPredicted RBP10.14□□□□□ -0.79
SPG11-201ENST00000261866 TRGC1P0CF51 173 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 ZNF525Q8N782 197 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 Q9H3A6 140 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 IGLV3-12A0A075B6K2 115 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 FAM90A26D6RGX4 464 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 HBBP68871 147 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 COX19Q49B96 90 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 SAPCD1Q5SSQ6 148 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 LCTP09848 1927 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 TDGF1P3P51864 188 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 ASCL4Q6XD76 172 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 NPIPB4C9JG80 1138 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 NDPQ00604 133 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 NPDC1Q9NQX5 325 aaPredicted RBP10.13□□□□□ -0.79
SPG11-201ENST00000261866 MORN2Q502X0 79 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 A0A0G2JMZ2 1700 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 LRRC37A2A6NM11 1700 aa10.13□□□□□ -0.79
SPG11-201ENST00000261866 A0A1B0GTI1 187 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 CNTFRP26992 372 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 PKIAP61925 76 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 C10orf55Q5SWW7 151 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 CD200R1LQ6Q8B3 271 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 PMCHL2Q9BQD1 86 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 MRPL32Q9BYC8 188 aaKnown RBP10.12□□□□□ -0.79
SPG11-201ENST00000261866 LILRA1O75019 489 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 RPS20P60866 119 aaKnown RBP10.12□□□□□ -0.79
SPG11-201ENST00000261866 SP5Q6BEB4 398 aaPredicted RBP10.12□□□□□ -0.79
SPG11-201ENST00000261866 OR9G4Q8NGQ1 327 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 CACNA1GO43497 2377 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 TRAV14DV4A0A0A6YYC5 116 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 PEX7O00628 323 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 GGNQ86UU5 652 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 TMEM167AQ8TBQ9 72 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 ALKBH7Q9BT30 221 aaPredicted RBP10.12□□□□□ -0.79
SPG11-201ENST00000261866 DOPEY2Q9Y3R5 2298 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 PYYP10082 97 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 Q5PR19 223 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 LINC00114Q6XXX2 140 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 INTS1Q8N201 2190 aaKnown RBP10.12□□□□□ -0.79
SPG11-201ENST00000261866 OR5A1Q8NGJ0 315 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 TCF20Q9UGU0 1960 aaKnown RBP10.12□□□□□ -0.79
SPG11-201ENST00000261866 NPIPB7O75200 414 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 CSRP3P50461 194 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 PSMG4Q5JS54 123 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms