RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 ZNF320A2RRD8 509 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 OR7C2O60412 319 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 REG1AP05451 166 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 CD99P14209 185 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 TMEM155Q4W5P6 130 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 VSTM5A8MXK1 200 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 SLC17A3O00476 420 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 SLC25A17O43808 307 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 TYMSP04818 313 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 NHLH1Q02575 133 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 TEX38Q6PEX7 206 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 C11orf42Q8N5U0 333 aa13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 FNDC4Q9H6D8 234 aaPredicted RBP13.37□□□□□ -0.27
UBQLN1-201ENST00000257468 TRAV5A0A0B4J249 113 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 TRAV20A0A0B4J274 112 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 DLL1O00548 723 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 MT-CO2P00403 227 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 IGHV1-8P0DP01 117 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 USF1P22415 310 aaPredicted RBP13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 PDPNQ86YL7 162 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 TGIF2LXQ8IUE1 241 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 TMEM167AQ8TBQ9 72 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 TMEM186Q96B77 213 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 NGBQ9NPG2 151 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 FAM90A27PA6NNH2 459 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 AMBPP02760 352 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 CRYBB3P26998 211 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 ERHP84090 104 aaKnown RBP13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 SLC35E1Q96K37 410 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 WASHC3Q9Y3C0 194 aa13.36□□□□□ -0.27
UBQLN1-201ENST00000257468 ZZEF1O43149 2961 aa13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 ENSAO43768 121 aaKnown RBP13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 APELAP0DMC3 54 aa13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 RBPJQ06330 500 aa13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 OR5I1Q13606 314 aa13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 C19orf35Q6ZS72 473 aa13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 LINC00311Q8N616 119 aa13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 ZNF596Q8TC21 504 aa13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 C11orf52Q96A22 123 aa13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 TECRQ9NZ01 308 aaKnown RBP13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 MRPL36Q9P0J6 103 aaKnown RBP13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 KAAG1Q9UBP8 84 aa13.35□□□□□ -0.27
UBQLN1-201ENST00000257468 CD3EP07766 207 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 OR5G3P0C626 314 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 APOBEC3AP31941 199 aaPredicted RBP13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 LCN2P80188 198 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 C9orf152Q5JTZ5 239 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 OR10G8Q8NGN5 311 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 UHRF2Q96PU4 802 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 VKORC1Q9BQB6 163 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 DMRT1Q9Y5R6 373 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 A0A1B0GUS0 222 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 GGTLC3B5MD39 225 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 CNTFRP26992 372 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 MRGPRG-AS1Q2M3A8 158 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 RUSC1-AS1Q66K80 236 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 EAF1Q96JC9 268 aaPredicted RBP13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 PRDM13Q9H4Q3 707 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 MSRB2Q9Y3D2 182 aa13.34□□□□□ -0.27
UBQLN1-201ENST00000257468 SIAH2O43255 324 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 AREGP15514 252 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 LGALS4P56470 323 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 ZNF90Q03938 601 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 FOXL1Q12952 345 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 NPIPB3Q92617 1050 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 TMEM133Q9H2Q1 129 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 TRAPPC1Q9Y5R8 145 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 A0A1W2PPI3 338 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 PSMB11A5LHX3 300 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 FAM71F2Q6NXP2 309 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 SSX8Q7RTT4 187 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 VSTM2AQ8TAG5 236 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 PFDN5Q99471 154 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 SLC25A33Q9BSK2 321 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 TMEM167BQ9NRX6 74 aa13.33□□□□□ -0.28
UBQLN1-201ENST00000257468 A0A087X0M5 115 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 A0A1B0GX30 115 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 A0A1W2PN81 502 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 SNRPCP09234 159 aaKnown RBP13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 ZNF137PP52743 207 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 ATP5IP56385 69 aaPredicted RBP13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 CENPWQ5EE01 88 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 C8orf31Q8N9H6 132 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 SLC25A2Q9BXI2 301 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 B9A039 149 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 SUMO1P63165 101 aaKnown RBP13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 CDSNQ15517 529 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 COA6Q5JTJ3 125 aaKnown RBP13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 HCP5Q6MZN7 132 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 PQLC2Q6ZP29 291 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 OR4A5Q8NH83 315 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 CACNG8Q8WXS5 425 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 IMMP2LQ96T52 175 aa13.32□□□□□ -0.28
UBQLN1-201ENST00000257468 IGKV1D-37A0A075B6S9 117 aa13.31□□□□□ -0.28
UBQLN1-201ENST00000257468 C9JCJ5 164 aa13.31□□□□□ -0.28
UBQLN1-201ENST00000257468 FRMD6-AS1P0C7T7 363 aa13.31□□□□□ -0.28
UBQLN1-201ENST00000257468 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
UBQLN1-201ENST00000257468 PYYP10082 97 aa13.31□□□□□ -0.28
UBQLN1-201ENST00000257468 HIST1H1BP16401 226 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms