RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 FAM90A9PA6NNJ1 464 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 MALP21145 153 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 CD24P25063 80 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 PLSCR4Q9NRQ2 329 aa7.26□□□□□ -1.25
PTCD3-201ENST00000254630 MPTX1A8MV57 137 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 DUSP14O95147 198 aaKnown RBP7.25□□□□□ -1.25
PTCD3-201ENST00000254630 OR9G9P0C7N8 305 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 TDGF1P13385 188 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 GATA2P23769 480 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-201ENST00000254630 RHOGP84095 191 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 GTF3AQ92664 365 aaKnown RBP7.25□□□□□ -1.25
PTCD3-201ENST00000254630 FNDC1Q4ZHG4 1894 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-201ENST00000254630 CD7P09564 240 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 LEMD1Q68G75 181 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 CIARTQ8N365 385 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-201ENST00000254630 TICRRQ7Z2Z1 1910 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 TIMM23O14925 209 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 CACNG7P62955 275 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 TMEM42Q69YG0 159 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 C18orf15Q96N68 181 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 IGHV2-26A0A0B4J1V2 119 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 IGKV1D-13A0A0B4J2D9 117 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 A0A0G2JNJ9 132 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 IGKV1-13P0DP09 117 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 SIGLEC15Q6ZMC9 328 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 ZCCHC24Q8N2G6 241 aaKnown RBP7.25□□□□□ -1.25
PTCD3-201ENST00000254630 SDHCQ99643 169 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-201ENST00000254630 Q9UFV3 132 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 CCDC88CQ9P219 2028 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 Q6AWC8 147 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 UNQ6494/PRO21346Q6UXR6 183 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 FOXC2Q99958 501 aa7.25□□□□□ -1.25
PTCD3-201ENST00000254630 NDUFA3O95167 84 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 KLRD1Q13241 179 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 BEX4Q9NWD9 120 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-201ENST00000254630 ZNF257Q9Y2Q1 563 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 TMEM250H0YL14 139 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 J3QRE1 110 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 C20orf204Q6ZNR8 217 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 ZNF585BQ52M93 769 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 TMEM200BQ69YZ2 307 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 TNFRSF14Q92956 283 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 RNF125Q96EQ8 232 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 MYOFQ9NZM1 2061 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 ERVH48-1M5A8F1 160 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 ATP5LO75964 103 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 EFNA4P52798 201 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 ZNF672Q499Z4 452 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-201ENST00000254630 ST6GALNAC3Q8NDV1 305 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 FAM131CQ96AQ9 280 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 TRGV11A0A075B6L2 103 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 TRAV41A0A0B4J266 112 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 A0A1B0GUT8 65 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 SRSF7Q16629 238 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTCD3-201ENST00000254630 TMEM183AQ8IXX5 376 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 ST20Q9HBF5 79 aa7.24□□□□□ -1.25
PTCD3-201ENST00000254630 TRAV9-1A0A075B6T8 112 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 MLNRO43193 412 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 CRYGSP22914 178 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 SRP19P09132 144 aaKnown RBP7.23□□□□□ -1.25
PTCD3-201ENST00000254630 PRCDQ00LT1 54 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 TPTE2P1Q5T6R2 138 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 SCN2AQ99250 2005 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 PLP1P60201 277 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 PAX8Q06710 450 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 COTL1Q14019 142 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 MESP1Q9BRJ9 268 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 TANC1Q9C0D5 1861 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 IGKV1-9A0A0C4DH69 117 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 RBMY1BA6NDE4 496 aaKnown RBP7.23□□□□□ -1.25
PTCD3-201ENST00000254630 RBMY1EA6NEQ0 496 aaKnown RBP7.23□□□□□ -1.25
PTCD3-201ENST00000254630 SOD3P08294 240 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 RBMY1DP0C7P1 496 aaKnown RBP7.23□□□□□ -1.25
PTCD3-201ENST00000254630 RBMY1A1P0DJD3 496 aaKnown RBP7.23□□□□□ -1.25
PTCD3-201ENST00000254630 RBMY1CP0DJD4 496 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 HOXA5P20719 270 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 FAM166AQ6J272 317 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 ZNF600Q6ZNG1 722 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 NABP1Q96AH0 204 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 ASCL2Q99929 193 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 DNAL4O96015 105 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 SRD5A1P18405 259 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 A0A087WV48 116 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 TMEM178BH3BS89 294 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 TMEM144Q7Z5S9 345 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 IMMP2LQ96T52 175 aa7.23□□□□□ -1.25
PTCD3-201ENST00000254630 MBNL3Q9NUK0 354 aaKnown RBP7.23□□□□□ -1.25
PTCD3-201ENST00000254630 MYO9BQ13459 2157 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 MDS2Q8NDY4 140 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 C8orf46Q8TAG6 207 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 TRAV21A0A0B4J279 112 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 NAT1P18440 290 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 FOXA3P55318 350 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-201ENST00000254630 IFITM2Q01629 132 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 SLC25A15Q9Y619 301 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 SAP30O75446 220 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 CNTFRP26992 372 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 TCF23Q7RTU1 214 aa7.22□□□□□ -1.25
PTCD3-201ENST00000254630 PAQR4Q8N4S7 273 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms