RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 DCAF16Q9NXF7 216 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 IDI2-AS1Q9NZ38 188 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 DYSFO75923 2080 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 IGHV3OR16-13A0A075B7E8 117 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 TRBV9A0A0B4J1U6 114 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 IGHV3-74A0A0B4J1X5 117 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 ISLRO14498 428 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 HIST1H1EP10412 219 aaKnown RBP7.73□□□□□ -1.17
COL21A1-201ENST00000244728 TDGF1P3P51864 188 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 LY6DQ14210 128 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 OR4A47Q6IF82 309 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 TMEM14EPQ6UXP3 125 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 NABP2Q9BQ15 211 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 LAMTOR2Q9Y2Q5 125 aa7.73□□□□□ -1.17
COL21A1-201ENST00000244728 IL18BPO95998 194 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 P01737 135 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 OR5AL1P0C617 328 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 ASCL5Q7RTU5 278 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 PNKDQ8N490 385 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 POLR3KQ9Y2Y1 108 aaPredicted RBP7.72□□□□□ -1.17
COL21A1-201ENST00000244728 BRCA2P51587 3418 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 HIVEP3Q5T1R4 2406 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 LY6G6EA0A0G2JKS1 128 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 A1L4Q6 167 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 BMPR1BO00238 502 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 CD24P25063 80 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 SSX8Q7RTT4 187 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 ERASQ7Z444 233 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 WFDC3Q8IUB2 231 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 RNASE7Q9H1E1 156 aaKnown RBP7.72□□□□□ -1.17
COL21A1-201ENST00000244728 U3KQA8 63 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 IGHV3OR16-8A0A075B7F1 116 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 A0A0C4DFX4 3053 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 COL8A1P27658 744 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 MAS1LP35410 378 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 SRSF7Q16629 238 aaKnown RBP eCLIP7.72□□□□□ -1.17
COL21A1-201ENST00000244728 SLC35E4Q6ICL7 350 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 C19orf35Q6ZS72 473 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 ST6GALNAC6Q969X2 333 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 PAXXQ9BUH6 204 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 MAP1LC3CQ9BXW4 147 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 WDR83OSQ9Y284 106 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 TNCP24821 2201 aa7.72□□□□□ -1.17
COL21A1-201ENST00000244728 CGB1A6NKQ9 187 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 IGFBP2P18065 325 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 TIMP3P35625 211 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 RPL30P62888 115 aaKnown RBP7.71□□□□□ -1.17
COL21A1-201ENST00000244728 ZNF497Q6ZNH5 498 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 FOXL2NBQ6ZUU3 175 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 C1orf174Q8IYL3 243 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 GCSAMQ8N6F7 178 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 NPIPB3Q92617 1050 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 CHODLQ9H9P2 273 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 GP6Q9HCN6 339 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 ELOVL5Q9NYP7 299 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 ETV2O00321 342 aaPredicted RBP7.71□□□□□ -1.17
COL21A1-201ENST00000244728 GATA2P23769 480 aaPredicted RBP7.71□□□□□ -1.17
COL21A1-201ENST00000244728 KIR2DL2P43627 348 aaPredicted RBP7.71□□□□□ -1.17
COL21A1-201ENST00000244728 FOXL1Q12952 345 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 SSC4DQ8WTU2 575 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 C1RLQ9NZP8 487 aa7.71□□□□□ -1.17
COL21A1-201ENST00000244728 IGKV1D-33P01593 117 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 IGKV1-33P01594 117 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 TCTAP57738 103 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 LINC00205P59089 165 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 HOXA4Q00056 320 aaPredicted RBP7.71□□□□□ -1.18
COL21A1-201ENST00000244728 MRPS18CQ9Y3D5 142 aaKnown RBP7.71□□□□□ -1.18
COL21A1-201ENST00000244728 PSPNO60542 156 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 CA2P00918 260 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 IGLV3-1P01715 115 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 FOXA3P55318 350 aaPredicted RBP7.71□□□□□ -1.18
COL21A1-201ENST00000244728 NRN1LQ496H8 165 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 WDR82Q6UXN9 313 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 Q6ZS49 121 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 MIR17HGQ75NE6 70 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 FAM57AQ8TBR7 257 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 JPT1Q9UK76 154 aa7.71□□□□□ -1.18
COL21A1-201ENST00000244728 C8orf88P0DMB2 117 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 PRB4P10163 310 aaPredicted RBP7.7□□□□□ -1.18
COL21A1-201ENST00000244728 ZNF585BQ52M93 769 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 KCNS1Q96KK3 526 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 CHD3Q12873 2000 aaKnown RBP7.7□□□□□ -1.18
COL21A1-201ENST00000244728 LEPROTL1O95214 131 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 B3GALT5-AS1P59052 145 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 SPACA3Q8IXA5 215 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 USP9YO00507 2555 aaPredicted RBP7.7□□□□□ -1.18
COL21A1-201ENST00000244728 NAV2Q8IVL1 2488 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 IGHV1-18A0A0C4DH31 117 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 HYPMO75409 117 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 ORM1P02763 201 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 LY6EQ16553 131 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 ZNF788Q6ZQV5 615 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 SNRNP40Q96DI7 357 aaKnown RBP7.7□□□□□ -1.18
COL21A1-201ENST00000244728 DIRC2Q96SL1 478 aa7.7□□□□□ -1.18
COL21A1-201ENST00000244728 IGKV3D-15A0A087WSY6 115 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 K7ERU9 68 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 IFNL4K9M1U5 179 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 M0QZ24 198 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 MOSP00540 346 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 MC5RP33032 325 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms