RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 OR9G9P0C7N8 305 aa6.34□□□□□ -1.4
RIF1-201ENST00000243326 RNASE4P34096 147 aaKnown RBP6.34□□□□□ -1.4
RIF1-201ENST00000243326 PEF1Q9UBV8 284 aaKnown RBP6.34□□□□□ -1.4
RIF1-201ENST00000243326 FOXA2Q9Y261 457 aaPredicted RBP6.34□□□□□ -1.4
RIF1-201ENST00000243326 ADAMTS7Q9UKP4 1686 aa6.34□□□□□ -1.4
RIF1-201ENST00000243326 TRAV17A0A0B4J275 112 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 GTSCR1Q86UQ5 136 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 TBR1Q16650 682 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 FAM216BQ8N7L0 139 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 TMEM170AQ8WVE7 144 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 TMEM78Q5T7P6 136 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 FBXW9Q5XUX1 488 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 SIGLEC12Q96PQ1 595 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 PLSCR2Q9NRY7 297 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 STAG3L2P0CL84 134 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 C10orf126Q8N4M7 172 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 METTL26Q96S19 204 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 ELOVL5Q9NYP7 299 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 TRAV24A0A0B4J272 114 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 TMEM155Q4W5P6 130 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 TIMM23BQ5SRD1 257 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 OR5A1Q8NGJ0 315 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 PARP14Q460N5 1801 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 C12orf77C9JDV5 145 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 LYPD3O95274 346 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 OR5AN1Q8NGI8 311 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 PPIAL4EA0A075B759 164 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 DLL1O00548 723 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 SNCGO76070 127 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 PPIAL4FP0DN26 164 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 MEIG1Q5JSS6 88 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 SCRT1Q9BWW7 348 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 PRTN3P24158 256 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 PAQR4Q8N4S7 273 aaPredicted RBP6.33□□□□□ -1.4
RIF1-201ENST00000243326 FGFBP3Q8TAT2 258 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 OR5P3Q8WZ94 311 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 IGHV1-45A0A0A0MS14 117 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 CACNG7P62955 275 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 MRAP2Q96G30 205 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 CDC42EP3Q9UKI2 254 aa6.33□□□□□ -1.4
RIF1-201ENST00000243326 CA11O75493 328 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 GZMHP20718 246 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 TEX38Q6PEX7 206 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 GPX1P07203 203 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 HBBP68871 147 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 C19orf48Q6RUI8 117 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 TMPRSS3P57727 454 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 EML6Q6ZMW3 1958 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 IGKV2-40A0A087WW87 121 aaPredicted RBP6.32□□□□□ -1.4
RIF1-201ENST00000243326 FGF16O43320 207 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 IGKV2D-40P01614 121 aaPredicted RBP6.32□□□□□ -1.4
RIF1-201ENST00000243326 SCNM1Q9BWG6 230 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 PEX7O00628 323 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 UNQ6494/PRO21346Q6UXR6 183 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 NUTF2P61970 127 aaKnown RBP6.32□□□□□ -1.4
RIF1-201ENST00000243326 TRAV2A0A0B4J234 112 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 SELLP14151 372 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 CA7P43166 264 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 IGKV1-9A0A0C4DH69 117 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 IGHV3-11P01762 117 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 GREB1Q4ZG55 1949 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 TRAV3A0A0B4J244 114 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 PCOLCEQ15113 449 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 SAPCD1Q5SSQ6 148 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 OR9G1Q8NH87 305 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 METRNQ9UJH8 293 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 hCG_38984A0A1B0GV85 526 aa6.32□□□□□ -1.4
RIF1-201ENST00000243326 F8VVB4 439 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 F8VWA3 439 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 CEACAM3P40198 252 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 HCFC1P51610 2035 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 MPV17L2Q567V2 206 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 TEX45Q8NA69 505 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 DYNLRB2Q8TF09 96 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 ZNF764Q96H86 408 aaPredicted RBP6.31□□□□□ -1.4
RIF1-201ENST00000243326 SCGB3A1Q96QR1 104 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 UBE2L6O14933 153 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 SUPT4H1P63272 117 aaKnown RBP6.31□□□□□ -1.4
RIF1-201ENST00000243326 SRSF4Q08170 494 aaKnown RBP6.31□□□□□ -1.4
RIF1-201ENST00000243326 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.31□□□□□ -1.4
RIF1-201ENST00000243326 ZNF664Q8N3J9 261 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 NRXN2Q9P2S2 1712 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 CITED2Q99967 270 aaPredicted RBP6.31□□□□□ -1.4
RIF1-201ENST00000243326 HAX1O00165 279 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 C19orf54Q5BKX5 351 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 FBXL15Q9H469 300 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 VSTM2AQ8TAG5 236 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 COL25A1Q9BXS0 654 aaPredicted RBP6.31□□□□□ -1.4
RIF1-201ENST00000243326 CHODLQ9H9P2 273 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 SFTPCP11686 197 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 COX19Q49B96 90 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 GREB1LQ9C091 1923 aaPredicted RBP6.31□□□□□ -1.4
RIF1-201ENST00000243326 KIAA1549Q9HCM3 1950 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 A0A1W2PRX2 142 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 SMIM10L1P0DMW3 83 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 HSPE1P61604 102 aaKnown RBP6.31□□□□□ -1.4
RIF1-201ENST00000243326 SMIM10Q96HG1 83 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 RPP21Q9H633 154 aaKnown RBP6.31□□□□□ -1.4
RIF1-201ENST00000243326 HIGD1CA8MV81 97 aa6.31□□□□□ -1.4
RIF1-201ENST00000243326 TRAV8-2A0A0B4J237 113 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms