RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 IGHV1-45A0A0A0MS14 117 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 PRSS23O95084 383 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 INO80CQ6PI98 192 aaPredicted RBP9.44□□□□□ -0.9
MSH6-201ENST00000234420 GPR132Q9UNW8 380 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 KLF12Q9Y4X4 402 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 TCRBV5S1A1TA0A578 114 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 IRF3Q14653 427 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 NFAM1Q8NET5 270 aaPredicted RBP9.43□□□□□ -0.9
MSH6-201ENST00000234420 RPRMQ9NS64 109 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 HIGD1CA8MV81 97 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 SRP19P09132 144 aaKnown RBP9.43□□□□□ -0.9
MSH6-201ENST00000234420 PLNP26678 52 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 ORMDL3Q8N138 153 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 PEMTQ9UBM1 199 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 GAGE2AQ6NT46 116 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 NPDC1Q9NQX5 325 aaPredicted RBP9.43□□□□□ -0.9
MSH6-201ENST00000234420 SIRT4Q9Y6E7 314 aaPredicted RBP9.43□□□□□ -0.9
MSH6-201ENST00000234420 SPINT1O43278 529 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 CGAP01215 116 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 CEACAM21Q3KPI0 293 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 STPG3Q8N7X2 389 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 FRMPD3Q5JV73 1810 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 TRAV30A0A087WSZ9 112 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 TRACP01848 142 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 RPL32P62910 135 aaKnown RBP9.43□□□□□ -0.9
MSH6-201ENST00000234420 BCL6BQ8N143 479 aaPredicted RBP9.43□□□□□ -0.9
MSH6-201ENST00000234420 ZCCHC24Q8N2G6 241 aaKnown RBP9.43□□□□□ -0.9
MSH6-201ENST00000234420 CEP250Q9BV73 2442 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 KCNE1BA0A087WTH5 132 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 ST6GALNAC2Q9UJ37 374 aa9.43□□□□□ -0.9
MSH6-201ENST00000234420 EPOPA6NHQ4 379 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 PRR33A8MZF0 331 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 VWC2LB2RUY7 222 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 MOSP00540 346 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 CA7P43166 264 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 ICAM4Q14773 271 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 PSG3Q16557 428 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 UBE2E2Q96LR5 201 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 CST9LQ9H4G1 147 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 LAMTOR3Q9UHA4 124 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 ZNF646O15015 1829 aaPredicted RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 BGLAPP02818 100 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 DLX4Q92988 240 aaPredicted RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 USP54Q70EL1 1684 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 GREB1LQ9C091 1923 aaPredicted RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 A0A087WWC5 75 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 GHRHP01286 108 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 NANOS3P60323 173 aaKnown RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 C5orf47Q569G3 176 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 RCC1LQ96I51 464 aaKnown RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 ATP6V0BQ99437 205 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 RNASE7Q9H1E1 156 aaKnown RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 A0A1W2PPC1 479 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 AHRRA9YTQ3 701 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 INS-IGF2F8WCM5 200 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 INSP01308 110 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 ZNF645Q8N7E2 425 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 PGLYRP1O75594 196 aaPredicted RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 SRSF3P84103 164 aaKnown RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 LCNL1Q6ZST4 164 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 LINC00305Q7Z4B0 112 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 PILRBQ9UKJ0 227 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 PSME4Q14997 1843 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 APOBEC3AP31941 199 aaPredicted RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 CEACAM8P31997 349 aaPredicted RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 ZNF385AQ96PM9 386 aaKnown RBP9.42□□□□□ -0.9
MSH6-201ENST00000234420 GGTLC1Q9BX51 225 aa9.42□□□□□ -0.9
MSH6-201ENST00000234420 IZUMO1RA6ND01 250 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 IGKCP01834 107 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 ATP5G3P48201 142 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 Q6ZNB5 142 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 LINC01555Q8NAE3 123 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 C10orf35Q96D05 121 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 CHST5Q9GZS9 411 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 MBNL3Q9NUK0 354 aaKnown RBP9.41□□□□□ -0.9
MSH6-201ENST00000234420 SEMA5BQ9P283 1151 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 UPK3AO75631 287 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 TOMM40O96008 361 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 DMRTC2Q8IXT2 367 aaPredicted RBP9.41□□□□□ -0.9
MSH6-201ENST00000234420 C5orf66Q9H5L9 145 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 TRAV8-3A0A0A6YYJ7 113 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 HELZP42694 1942 aaKnown RBP9.41□□□□□ -0.9
MSH6-201ENST00000234420 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 SVIPQ8NHG7 77 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 ZMAT4Q9H898 229 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 DSPPQ9NZW4 1301 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 A0A0J9YW62 118 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 RPL8P62917 257 aaKnown RBP9.41□□□□□ -0.9
MSH6-201ENST00000234420 SDF2L1Q9HCN8 221 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 TSSC4Q9Y5U2 329 aaPredicted RBP9.41□□□□□ -0.9
MSH6-201ENST00000234420 UNQ6494/PRO21346Q6UXR6 183 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 HIST3H2BBQ8N257 126 aa9.41□□□□□ -0.9
MSH6-201ENST00000234420 CXorf51AA0A1B0GTR3 108 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 EVI2AP22794 236 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 PSMG4Q5JS54 123 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 FAM214BQ7L5A3 538 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 FOXA2Q9Y261 457 aaPredicted RBP9.4□□□□□ -0.9
MSH6-201ENST00000234420 PLCE1Q9P212 2302 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms