RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 COX11Q9Y6N1 276 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 RGPD3A6NKT7 1758 aaPredicted RBP6.94□□□□□ -1.3
APOB-201ENST00000233242 RGPD4Q7Z3J3 1758 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 C12orf77C9JDV5 145 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 SNAI2O43623 268 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 RRN3P1Q2M238 152 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 DUSP15Q9H1R2 295 aaPredicted RBP6.94□□□□□ -1.3
APOB-201ENST00000233242 WNK1Q9H4A3 2382 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 CD5LO43866 347 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 TEX45Q8NA69 505 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 SLC25A53Q5H9E4 307 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 CLEC7AQ9BXN2 247 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 GAGE12BA1L429 117 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 C1QL2Q7Z5L3 287 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 ZNF501Q96CX3 271 aaPredicted RBP6.94□□□□□ -1.3
APOB-201ENST00000233242 IL9P15248 144 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 GPHA2Q96T91 129 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 SNRPD3P62318 126 aaKnown RBP6.94□□□□□ -1.3
APOB-201ENST00000233242 ATXN8Q156A1 80 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 Q9H3A6 140 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 IGHV1-45A0A0A0MS14 117 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 TDHQ8IZJ6 230 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 PROB1E7EW31 1015 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 OCIAD2Q56VL3 154 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 FADS6Q8N9I5 356 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.93□□□□□ -1.3
APOB-201ENST00000233242 AGFG2O95081 481 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 IGKCP01834 107 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 ZNF56Q15929 161 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 OR10W1Q8NGF6 305 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 RAX2Q96IS3 184 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 RHOGP84095 191 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 ATP5G2Q06055 141 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 ACP7Q6ZNF0 438 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 OCC1Q8TAD7 63 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 KLF14Q8TD94 323 aaPredicted RBP6.93□□□□□ -1.3
APOB-201ENST00000233242 ITLN1Q8WWA0 313 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 SPSB2Q99619 263 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 A0A0G2JMM0 328 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 A0A1W2PPB8 328 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 KIR3DP1A8MWS1 328 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 C4orf51C9J302 202 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 LINC01551Q86U37 167 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 PILRBQ9UKJ0 227 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 SCN10AQ9Y5Y9 1956 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 TRAV24A0A0B4J272 114 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 FOXI3A8MTJ6 420 aaPredicted RBP6.93□□□□□ -1.3
APOB-201ENST00000233242 ZNF664Q8N3J9 261 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 F2Z2F3 143 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 IFI27L1Q96BM0 104 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 R4GN57 208 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 RNFT1Q5M7Z0 435 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 CEACAM4O75871 244 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 FAM71F2Q6NXP2 309 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 MIR17HGQ75NE6 70 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 MMP23AO75900 390 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 FAM159AQ6UWV7 190 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 LHFPL1Q86WI0 220 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 KBTBD11-OT1A0A1B0GTJ5 212 aa6.93□□□□□ -1.3
APOB-201ENST00000233242 ITGBL1O95965 494 aaPredicted RBP6.92□□□□□ -1.3
APOB-201ENST00000233242 SPINK2P20155 84 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 WDR83OSQ9Y284 106 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 RALGAPA2Q2PPJ7 1873 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 C1orf185Q5T7R7 199 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 RNF182Q8N6D2 247 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 COQ2Q96H96 371 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 SPANXCQ9NY87 97 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 UNQ5815/PRO19632Q6UWF5 114 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
APOB-201ENST00000233242 EPDR1Q9UM22 224 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 GAS1P54826 345 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 EEF1AKMT3Q96AZ1 226 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 LOC101059948A0A1B0GTJ6 334 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 C17orf98A8MV24 154 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 PVRIGQ6DKI7 326 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 ARPC1AQ92747 370 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 IGHV2-70P01814 119 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 PAX2Q02962 417 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 ZNF826PQ6ZT77 177 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 RNASE7Q9H1E1 156 aaKnown RBP6.92□□□□□ -1.3
APOB-201ENST00000233242 ARRDC1-AS1Q9H2J1 176 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 NAPSAO96009 420 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 GPR6P46095 362 aaPredicted RBP6.92□□□□□ -1.3
APOB-201ENST00000233242 C9orf50Q5SZB4 431 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 S100A7L2Q5SY68 101 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 FGF11Q92914 225 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 NDUFA3O95167 84 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 KLF17Q5JT82 389 aaPredicted RBP6.92□□□□□ -1.3
APOB-201ENST00000233242 PLXNB2O15031 1838 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 CNTFRP26992 372 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 OR13C6PQ8NH95 151 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 CFHR5Q9BXR6 569 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
APOB-201ENST00000233242 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
APOB-201ENST00000233242 C5orf67F2Z3F1 127 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 GREM1O60565 184 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
APOB-201ENST00000233242 RBMY1A1P0DJD3 496 aaKnown RBP6.92□□□□□ -1.3
APOB-201ENST00000233242 RBMY1CP0DJD4 496 aa6.92□□□□□ -1.3
APOB-201ENST00000233242 NPFFO15130 113 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms