RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 AREGP15514 252 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 TNFRSF9Q07011 255 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 TMEM252Q8N6L7 170 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 OR1N2Q8NGR9 330 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 PRORYQ9H606 182 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 BET1LQ9NYM9 111 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 HSPB7Q9UBY9 170 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 TRAV14DV4A0A0A6YYC5 116 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 USF3Q68DE3 2245 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 SGMS2Q8NHU3 365 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 SLX1AQ9BQ83 275 aa11.4□□□□□ -0.58
SIX4-201ENST00000216513 KLF2Q9Y5W3 355 aaPredicted RBP11.4□□□□□ -0.59
SIX4-201ENST00000216513 NPIPB6E9PJ23 425 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 CRYBB3P26998 211 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 LEMD1Q68G75 181 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 ERASQ7Z444 233 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 SPTBN1Q01082 2364 aaKnown RBP11.39□□□□□ -0.59
SIX4-201ENST00000216513 SNAI2O43623 268 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 TNFSF13O75888 250 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 RNASE4P34096 147 aaKnown RBP11.39□□□□□ -0.59
SIX4-201ENST00000216513 VAX1Q5SQQ9 334 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 M0R1W7 72 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 NPIPB7O75200 414 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 TFF3Q07654 80 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 NDUFS7O75251 213 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 ZNF324O75467 553 aaPredicted RBP11.39□□□□□ -0.59
SIX4-201ENST00000216513 HERVK_113P61574 105 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 MINOS1Q5TGZ0 78 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 ANAPC16Q96DE5 110 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 MINOS1-NBL1R4GNA1 71 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 HGFACQ04756 655 aa11.39□□□□□ -0.59
SIX4-201ENST00000216513 PITX3O75364 302 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 MORN2Q502X0 79 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 HIST2H2BCQ6DN03 193 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 OR9G9P0C7N8 305 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 RAB37Q96AX2 223 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 LINC00305Q7Z4B0 112 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 SRRM5B3KS81 715 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 ZNF660Q6AZW8 331 aaPredicted RBP11.38□□□□□ -0.59
SIX4-201ENST00000216513 PTPRQQ9UMZ3 2332 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 TMEM155Q4W5P6 130 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 RPRMQ9NS64 109 aa11.38□□□□□ -0.59
SIX4-201ENST00000216513 A0A087X0M5 115 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 A0A1B0GX30 115 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 ANOS1P23352 680 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 HOXA3O43365 443 aaPredicted RBP11.37□□□□□ -0.59
SIX4-201ENST00000216513 STPG2Q8N412 459 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 IFT22Q9H7X7 185 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 PCNX2A6NKB5 2137 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 TMEM14DPA8MWL7 114 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 PRR32B1ATL7 298 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 PDE6DO43924 150 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 ZNF415Q09FC8 603 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 LYRM2Q9NU23 88 aaPredicted RBP11.37□□□□□ -0.59
SIX4-201ENST00000216513 FER1L5A0AVI2 2057 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 PAX8Q06710 450 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 IGF2-ASQ6U949 168 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 NABP1Q96AH0 204 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 OR51M1Q9H341 326 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 GPR132Q9UNW8 380 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
SIX4-201ENST00000216513 NOTCH4Q99466 2003 aa11.37□□□□□ -0.59
SIX4-201ENST00000216513 CTXND1A0A1B0GTU2 59 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 PNRC1Q12796 327 aaPredicted RBP11.36□□□□□ -0.59
SIX4-201ENST00000216513 CREBBPQ92793 2442 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 RIPPLY3P57055 190 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 CD177Q8N6Q3 437 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 GAFA1Q96PS6 74 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 ASCL2Q99929 193 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 YPEL1O60688 119 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 YPEL2Q96QA6 119 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 DOCK7Q96N67 2140 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 IGHV1-69DA0A0B4J2H0 117 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 A0A1B0GTI1 187 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 CXorf65A6NEN9 183 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 IGHV1-69P01742 117 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 SOD3P08294 240 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 ZNF319Q9P2F9 582 aa11.36□□□□□ -0.59
SIX4-201ENST00000216513 IFITM10A6NMD0 228 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 ISLRO14498 428 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 GGCTO75223 188 aaKnown RBP11.35□□□□□ -0.59
SIX4-201ENST00000216513 HINT1P49773 126 aaPredicted RBP11.35□□□□□ -0.59
SIX4-201ENST00000216513 PSMG4Q5JS54 123 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 ZNF843Q8N446 348 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 CBY1Q9Y3M2 126 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 HEATR1Q9H583 2144 aaKnown RBP11.35□□□□□ -0.59
SIX4-201ENST00000216513 FANCMQ8IYD8 2048 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 IGKV3D-20A0A0C4DH25 116 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 SLC17A3O00476 420 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 GOLT1AQ6ZVE7 132 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 PUSL1Q8N0Z8 303 aaKnown RBP11.35□□□□□ -0.59
SIX4-201ENST00000216513 TRAV24A0A0B4J272 114 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 CD55P08174 381 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 ICAM4Q14773 271 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 HSPB9Q9BQS6 159 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 PRDM13Q9H4Q3 707 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 C5orf63A6NC05 138 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms