RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 WNT10AQ9GZT5 417 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 CXorf1O96002 111 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 ZADH2Q8N4Q0 377 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 ANAPC16Q96DE5 110 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 C1orf159Q96HA4 380 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 TIMM9Q9Y5J7 89 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 RPLP1P05386 114 aaKnown RBP12.34□□□□□ -0.43
EFNB1-201ENST00000204961 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
EFNB1-201ENST00000204961 C17orf58Q2M2W7 97 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 ST6GALNAC3Q8NDV1 305 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 FAM168AQ92567 244 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 COMMD5Q9GZQ3 224 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 SLC25A15Q9Y619 301 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 DOPEY2Q9Y3R5 2298 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 TCTAP57738 103 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 HSPE1P61604 102 aaKnown RBP12.34□□□□□ -0.43
EFNB1-201ENST00000204961 RHOBP62745 196 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 ACTL10Q5JWF8 245 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 MMD2Q8IY49 270 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 OR10X1Q8NGY0 326 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 ZCCHC14Q8WYQ9 949 aaKnown RBP12.34□□□□□ -0.43
EFNB1-201ENST00000204961 ELOVL5Q9NYP7 299 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 IDI2-AS1Q9NZ38 188 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 LY6HO94772 140 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 EIF4EBP1Q13541 118 aaPredicted RBP12.34□□□□□ -0.43
EFNB1-201ENST00000204961 TRAT1Q6PIZ9 186 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 ERASQ7Z444 233 aa12.34□□□□□ -0.43
EFNB1-201ENST00000204961 A0A1B0GWJ7 208 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 STAG3L2P0CL84 134 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 STAG3L3P0CL85 134 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 SAA1P0DJI8 122 aaPredicted RBP12.33□□□□□ -0.44
EFNB1-201ENST00000204961 Q6ZVH6 145 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 NPIPB3Q92617 1050 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 TPSG1Q9NRR2 321 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 RNF7Q9UBF6 113 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 SLC25A17O43808 307 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 PDE6DO43924 150 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 IGHV1-46P01743 117 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 LYPD2Q6UXB3 125 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 ZNF355PQ9NSJ1 428 aa12.33□□□□□ -0.44
EFNB1-201ENST00000204961 PIGBOS1A0A0B4J2F0 54 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 DLEU1O43261 78 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 UBE2L3P68036 154 aaKnown RBP12.32□□□□□ -0.44
EFNB1-201ENST00000204961 PLA2G2CQ5R387 149 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 RITA1Q96K30 269 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 RNF114Q9Y508 228 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 CSPG4Q6UVK1 2322 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 M0QZ24 198 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 CCKARP32238 428 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 AMTP48728 403 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 MCRIP2Q9BUT9 160 aaKnown RBP12.32□□□□□ -0.44
EFNB1-201ENST00000204961 A0A1W2PN81 502 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 ZNF883P0CG24 379 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 C1orf194Q5T5A4 169 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 JPT1Q9UK76 154 aa12.32□□□□□ -0.44
EFNB1-201ENST00000204961 KBTBD11-OT1A0A1B0GTJ5 212 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 COX7A1P24310 79 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 ZNF137PP52743 207 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 OR5AU1Q8NGC0 362 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 KCNIP2Q9NS61 270 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 FAM215AQ9Y5M1 114 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 C15orf61A6NNL5 157 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 A8MXE2 369 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 GGCTO75223 188 aaKnown RBP12.31□□□□□ -0.44
EFNB1-201ENST00000204961 ZNF253O75346 499 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 CT45A6P0DMU7 189 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 CT45A5P0DMU8 189 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 CT45A7P0DMV0 189 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 PMCHL1Q16048 86 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 DNLZQ5SXM8 178 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 VAMP8Q9BV40 100 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 SAP30LQ9HAJ7 183 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 PLSCR4Q9NRQ2 329 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 TP73-AS1Q9UF72 201 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 LINC00869P0C866 280 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 PAX1P15863 534 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 SRIP30626 198 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 RNF151Q2KHN1 245 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 TIGITQ495A1 244 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 RUSC1-AS1Q66K80 236 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 RCHY1Q96PM5 261 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 SELENOKQ9Y6D0 94 aa12.31□□□□□ -0.44
EFNB1-201ENST00000204961 IGHV3OR16-8A0A075B7F1 116 aa12.3□□□□□ -0.44
EFNB1-201ENST00000204961 WNT2P09544 360 aa12.3□□□□□ -0.44
EFNB1-201ENST00000204961 PRR30Q53SZ7 412 aaPredicted RBP12.3□□□□□ -0.44
EFNB1-201ENST00000204961 Q6ZWC4 215 aa12.3□□□□□ -0.44
EFNB1-201ENST00000204961 OR1B1Q8NGR6 318 aa12.3□□□□□ -0.44
EFNB1-201ENST00000204961 EAF1Q96JC9 268 aaPredicted RBP12.3□□□□□ -0.44
EFNB1-201ENST00000204961 SLC25A10Q9UBX3 287 aaPredicted RBP12.3□□□□□ -0.44
EFNB1-201ENST00000204961 TEX50A0A1B0GTY4 177 aa12.3□□□□□ -0.44
EFNB1-201ENST00000204961 SIAH2O43255 324 aa12.3□□□□□ -0.44
EFNB1-201ENST00000204961 C11orf42Q8N5U0 333 aa12.3□□□□□ -0.44
EFNB1-201ENST00000204961 PYGO2Q9BRQ0 406 aa12.3□□□□□ -0.44
EFNB1-201ENST00000204961 MRPL36Q9P0J6 103 aaKnown RBP12.3□□□□□ -0.44
EFNB1-201ENST00000204961 CORTO00230 105 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 YPEL1O60688 119 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 RAB4AP20338 218 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 CNTFRP26992 372 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms