RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 NUDT11Q96G61 164 aa6.96□□□□□ -1.3
CACNA1A-254ENST00000637952 PSENENQ9NZ42 101 aa6.96□□□□□ -1.3
CACNA1A-254ENST00000637952 STRAPQ9Y3F4 350 aaKnown RBP6.96□□□□□ -1.3
CACNA1A-254ENST00000637952 MDFIC2A0A1B0GVS7 189 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 KBTBD11O94819 623 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF546Q86UE3 836 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 C8orf46Q8TAG6 207 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 MS4A10Q96PG2 267 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 RTBDNQ9BSG5 229 aaPredicted RBP6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 FAM103A1Q9BTL3 118 aaKnown RBP6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 SIRPDQ9H106 197 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 VWC2LB2RUY7 222 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 M0QZK8 103 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 HOXA3O43365 443 aaPredicted RBP6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 CD1BP29016 333 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 BLOC1S1P78537 153 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 HCP5Q6MZN7 132 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 FAM219AQ8IW50 185 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 C11orf44Q8N8P7 122 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 LY6G5BQ8NDX9 201 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF471Q9BX82 626 aaPredicted RBP6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 RFNGQ9Y644 331 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 LINC00473A8K010 186 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 CCL25O15444 150 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 PRH1P02810 166 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 GAMTQ14353 236 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 OR4A47Q6IF82 309 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 PPP1R27Q86WC6 154 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 BCL6BQ8N143 479 aaPredicted RBP6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 OR11H6Q8NGC7 330 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 MITD1Q8WV92 249 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 SPXQ9BT56 116 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF436Q9C0F3 470 aaPredicted RBP6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 ARL6Q9H0F7 186 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 MMP24Q9Y5R2 645 aa6.95□□□□□ -1.3
CACNA1A-254ENST00000637952 BORCS7-ASMTA0A0B4J1R7 106 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 IGHV4-59P01825 116 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 OPRK1P41145 380 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 CLINT1Q14677 625 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 LINC00311Q8N616 119 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 PPP1R1CQ8WVI7 109 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 GPR146Q96CH1 333 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 SLC35E1Q96K37 410 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 RELNP78509 3460 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 H0YJW9 148 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 TCF21O43680 179 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 SAA1P0DJI8 122 aaPredicted RBP6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 PKIAP61925 76 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 HBG1P69891 147 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 HBG2P69892 147 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 ANKRD55Q3KP44 614 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 LHFPL1Q86WI0 220 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 OR11H7Q8NGC8 314 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 ACY3Q96HD9 319 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 MFFQ9GZY8 342 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 MOB4Q9Y3A3 225 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 KMT2BQ9UMN6 2715 aaPredicted RBP6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 RAI1Q7Z5J4 1906 aaPredicted RBP6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 IGHV3-21A0A0B4J1V1 117 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 SYNGR2O43760 224 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 IGKV1-16P04430 117 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 REG1AP05451 166 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 IL6RP08887 468 aaPredicted RBP6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 RND3P61587 244 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 EIF5AP63241 154 aaKnown RBP6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 PDLIM3Q53GG5 364 aaPredicted RBP6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 Q56UQ5 140 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 OR10P1Q8NGE3 313 aa6.94□□□□□ -1.3
CACNA1A-254ENST00000637952 A0A1B0GU03 582 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 MSGN1A6NI15 193 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 VENTXO95231 258 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 UCP1P25874 307 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 HSPE1P61604 102 aaKnown RBP6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 FABP9Q0Z7S8 132 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 TMEM187Q14656 261 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 GLMPQ8WWB7 406 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 MLXQ9UH92 298 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 RCL1Q9Y2P8 373 aaKnown RBP6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 FLNAP21333 2647 aaKnown RBP6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 RRHO14718 337 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 CHST1O43916 411 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 CST7O76096 145 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 ACSM6Q6P461 480 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 TMEM88Q6PEY1 159 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 TCF23Q7RTU1 214 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 LFNGQ8NES3 379 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 QTRT1Q9BXR0 403 aaKnown RBP6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF320A2RRD8 509 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 CDS2O95674 445 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 CA2P00918 260 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 VDAC2P45880 294 aaPredicted RBP6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 RAB32Q13637 225 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 HYLS1Q96M11 299 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 RNF2Q99496 336 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 NOTCH3Q9UM47 2321 aa6.93□□□□□ -1.3
CACNA1A-254ENST00000637952 ZFP92A6NM28 416 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 TMEM230Q96A57 120 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 RBMXL1Q96E39 390 aaKnown RBP6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 GALNT14Q96FL9 552 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF48Q96MX3 618 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms