RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 FBXL19-AS1Q494R0 122 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 UBE2NLQ5JXB2 153 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 CLLU1OSQ5K130 101 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 MUC21Q5SSG8 566 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 MRPL54Q6P161 138 aaKnown RBP2.29□□□□□ -2.04
VIM-210ENST00000637053 C22orf39Q6P5X5 142 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 ZNF880Q6PDB4 577 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 MORN3Q6PF18 240 aaPredicted RBP2.29□□□□□ -2.04
VIM-210ENST00000637053 Q6ZS49 121 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 SHISA6Q6ZSJ9 500 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 Q6ZUT4 128 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 AAED1Q7RTV5 226 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 LINC00305Q7Z4B0 112 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TRAPPC6BQ86SZ2 158 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 C1orf174Q8IYL3 243 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 C10orf126Q8N4M7 172 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 DRAM1Q8N682 238 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 ZNF709Q8N972 641 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 LINC00301Q8NCQ3 95 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 OR2A12Q8NGT7 310 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 OR10AC1Q8NH08 325 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TWIST2Q8WVJ9 160 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TSLPQ969D9 159 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 RPL36ALQ969Q0 106 aaKnown RBP2.29□□□□□ -2.04
VIM-210ENST00000637053 C11orf52Q96A22 123 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 CNRIP1Q96F85 164 aaPredicted RBP2.29□□□□□ -2.04
VIM-210ENST00000637053 C2orf50Q96LR7 162 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 GABARAPL3Q9BY60 117 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TAAR3PQ9P1P4 343 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 CTSZQ9UBR2 303 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 UQCR10Q9UDW1 63 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 RNF11Q9Y3C5 154 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TMEM131Q92545 1883 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 HECW1Q76N89 1606 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 MAPKBP1O60336 1514 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 MAGI3Q5TCQ9 1506 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 TOPBP1Q92547 1522 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 NEO1Q92859 1461 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 CASKIN1Q8WXD9 1431 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 DSPPQ9NZW4 1301 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 TRBV20OR9-2A0A075B6H5 130 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 IGLV5-45A0A087WSX0 123 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 IGHV3-20A0A0C4DH32 117 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 IGHV1-58A0A0C4DH39 117 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 A0A0J9YW62 118 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 TEX48A0A1B0GUV7 120 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 IRGMA1A4Y4 181 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 DPRXA6NFQ7 191 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 A8MWV9 139 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 EPM2AB3EWF7 344 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 K7EP34 96 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 M0R233 179 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 LGALS9O00182 355 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 GEMIN2O14893 280 aaKnown RBP2.28□□□□□ -2.04
VIM-210ENST00000637053 TAX1BP3O14907 124 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 UBE2L6O14933 153 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 SOCS1O15524 211 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 FSTL3O95633 263 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 HRASP01112 189 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 IGHG1P01857 330 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 MT-ND6P03923 174 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 MT-ATP8P03928 68 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 IGLL1P15814 213 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 CRISP2P16562 243 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 MPGP29372 298 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 ZNF138P52744 262 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 LINC00313P59037 77 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 ADIGQ0VDE8 80 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 TMEM183BQ1AE95 376 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 KIAA1644Q3SXP7 199 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 C1orf100Q5SVJ3 147 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 LINC00173Q6ZV60 143 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 C17orf82Q86X59 251 aaPredicted RBP2.28□□□□□ -2.04
VIM-210ENST00000637053 RPP25LQ8N5L8 163 aaKnown RBP2.28□□□□□ -2.04
VIM-210ENST00000637053 LINC00311Q8N616 119 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 OR4X2Q8NGF9 303 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 OR4A5Q8NH83 315 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 MRPL30Q8TCC3 161 aaKnown RBP2.28□□□□□ -2.04
VIM-210ENST00000637053 DCANP1Q8TF63 244 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 GEMIN6Q8WXD5 167 aaKnown RBP2.28□□□□□ -2.04
VIM-210ENST00000637053 NABP1Q96AH0 204 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 LINC00526Q96FQ7 95 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 URB1-AS1Q96HZ7 61 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 LYZL4Q96KX0 146 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 C18orf15Q96N68 181 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 CCL13Q99616 98 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 TBL1YQ9BQ87 522 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 SEC11CQ9BY50 192 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 C21orf62Q9NYP8 219 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 CKLFQ9UBR5 152 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 CHCHD2Q9Y6H1 151 aaPredicted RBP2.28□□□□□ -2.04
VIM-210ENST00000637053 SCN10AQ9Y5Y9 1956 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 SBF1O95248 1867 aa2.28□□□□□ -2.04
VIM-210ENST00000637053 CHD2O14647 1828 aaKnown RBP2.28□□□□□ -2.04
VIM-210ENST00000637053 TOP2AP11388 1531 aaKnown RBP2.27□□□□□ -2.05
VIM-210ENST00000637053 OTOFQ9HC10 1997 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 RLFQ13129 1914 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 IGKV1-27A0A075B6S5 117 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 IGLC7A0M8Q6 106 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 ODAMA1E959 279 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms