RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SPACA3Q8IXA5 215 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 OR10D3Q8NH80 312 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 OR1L1Q8NH94 360 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 NEU4Q8WWR8 484 aaPredicted RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 GALMQ96C23 342 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 C10orf35Q96D05 121 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 BORCS8Q96FH0 119 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 RNASE7Q9H1E1 156 aaKnown RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 AKIRIN1Q9H9L7 192 aaPredicted RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 TECRQ9NZ01 308 aaKnown RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 HSPB8Q9UJY1 196 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 KBTBD11-OT1A0A1B0GTJ5 212 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 C17orf51A8MQB3 221 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 DNPH1O43598 174 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 ACTL6BO94805 426 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 SCTP09683 121 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 SPINK8P0C7L1 97 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 TIRAPP58753 221 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 FOXI2Q6ZQN5 318 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 MOB1BQ7L9L4 216 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 DOLPP1Q86YN1 238 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 LYZL4Q96KX0 146 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 PRTFDC1Q9NRG1 225 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 C5orf63A6NC05 138 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 NPIPB13A6NJU9 1138 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 SH2D7A6NKC9 451 aaPredicted RBP6.59□□□□□ -1.35
VPS11-209ENST00000622309 NPIPB5A8MRT5 1133 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 NPIPB4C9JG80 1138 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 WISP1O95388 367 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 CXorf1O96002 111 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 SP9P0CG40 484 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 KIR2DL1P43626 348 aaPredicted RBP6.59□□□□□ -1.35
VPS11-209ENST00000622309 RPS21P63220 83 aaKnown RBP6.59□□□□□ -1.35
VPS11-209ENST00000622309 GCSAMLQ5JQS6 135 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 ANAPC13Q9BS18 74 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 SIRPDQ9H106 197 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 MBNL3Q9NUK0 354 aaKnown RBP6.59□□□□□ -1.35
VPS11-209ENST00000622309 CYSLTR1Q9Y271 337 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 TIMM8BQ9Y5J9 83 aaPredicted RBP6.59□□□□□ -1.35
VPS11-209ENST00000622309 FRYLO94915 3013 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 IZUMO1RA6ND01 250 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 LAMTOR5O43504 91 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 SSBP2P81877 361 aaPredicted RBP6.59□□□□□ -1.35
VPS11-209ENST00000622309 ATP5G2Q06055 141 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 TRIP6Q15654 476 aaKnown RBP6.59□□□□□ -1.35
VPS11-209ENST00000622309 SLC23A3Q6PIS1 610 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 SPAG8Q99932 426 aaPredicted RBP6.59□□□□□ -1.35
VPS11-209ENST00000622309 OSTCQ9NRP0 149 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 B4GALT7Q9UBV7 327 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 SLC17A4Q9Y2C5 497 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 MYO7BQ6PIF6 2116 aa6.59□□□□□ -1.35
VPS11-209ENST00000622309 ZDBF2Q9HCK1 2354 aa6.59□□□□□ -1.36
VPS11-209ENST00000622309 TRGV10A0A0A0MS01 117 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 LIPT2A6NK58 231 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 FAM90A27PA6NNH2 459 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 E9PLN8 166 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 KLF7O75840 302 aaPredicted RBP6.58□□□□□ -1.36
VPS11-209ENST00000622309 MFAP2P55001 183 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 FBXW4P57775 412 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 KLF5Q13887 457 aaPredicted RBP6.58□□□□□ -1.36
VPS11-209ENST00000622309 KIR2DS3Q14952 304 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 CENPWQ5EE01 88 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 PQLC2Q6ZP29 291 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 SPANXB1Q9NS25 103 aaPredicted RBP6.58□□□□□ -1.36
VPS11-209ENST00000622309 DKK4Q9UBT3 224 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 LRRC30A6NM36 301 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 PPP1CAP62136 330 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 C1orf61Q13536 156 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 LINC00173Q6ZV60 143 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 OR4A16Q8NH70 328 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 GPR82Q96P67 336 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 VGLL1Q99990 258 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 HRASLS2Q9NWW9 162 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 RABAC1Q9UI14 185 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 R4GN57 208 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 WDFY4Q6ZS81 3184 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 KIR2DS1A0A191URI9 304 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 A0A1W2PQF6 199 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 PRSS38A1L453 326 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 F8W1H4 67 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 CLDN14O95500 239 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 IGHG1P01857 330 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 SMIM13P0DJ93 91 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 KIR2DS4P43632 304 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 WFDC2Q14508 124 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 KIR2DS1Q14954 304 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 IBA57Q5T440 356 aaKnown RBP6.58□□□□□ -1.36
VPS11-209ENST00000622309 C8orf86Q6ZUL3 223 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 DEFB119Q8N690 84 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 OR52E5Q8NH55 327 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 PKIBQ9C010 78 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 DMDP11532 3685 aa6.58□□□□□ -1.36
VPS11-209ENST00000622309 A1L4Q6 167 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 ETDBQ3ZM63 59 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 LYSMD4Q5XG99 296 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 ENY2Q9NPA8 101 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 VPREB3Q9UKI3 123 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 OR2W1Q9Y3N9 320 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 YTHDF2Q9Y5A9 579 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms