RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 A6NDX4 124 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 NAP1L6A6NFF2 107 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 SLC17A3O00476 420 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 SNAI2O43623 268 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 PSPNO60542 156 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 SLC25A4P12235 298 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 S100GP29377 79 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 ID1P41134 155 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 SNU13P55769 128 aaKnown RBP6.82□□□□□ -1.32
GPC6-202ENST00000617456 EDDM3BP56851 147 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 NANOS3P60323 173 aaKnown RBP6.82□□□□□ -1.32
GPC6-202ENST00000617456 BLCAPP62952 87 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 MEF2DQ14814 521 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 ODF4Q2M2E3 257 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 TMEM69Q5SWH9 247 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 C22orf42Q6IC83 251 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 TEX38Q6PEX7 206 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 DHRS11Q6UWP2 260 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 ZNF676Q8N7Q3 588 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 OR5AP2Q8NGF4 316 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 SIGMAR1Q99720 223 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 ZNF649Q9BS31 505 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 CLEC7AQ9BXN2 247 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 SMDT1Q9H4I9 107 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 LINC00574Q9H8X3 128 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 EXOSC4Q9NPD3 245 aaKnown RBP6.82□□□□□ -1.32
GPC6-202ENST00000617456 OR6C3Q9NZP0 311 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 TENM2Q9NT68 2774 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 IGHV2-26A0A0B4J1V2 119 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 IFITM5A6NNB3 132 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 J3QLW9 94 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 BCL2L11O43521 198 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 PDE6DO43924 150 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 TMEM50AO95807 157 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 IGLV1-47P01700 117 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 ZNF19P17023 458 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 HTR1DP28221 377 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 RPL29P47914 159 aaKnown RBP6.81□□□□□ -1.32
GPC6-202ENST00000617456 NPBWR2P48146 333 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 RPL32P62910 135 aaKnown RBP6.81□□□□□ -1.32
GPC6-202ENST00000617456 KISS1Q15726 138 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 ZNF585BQ52M93 769 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 FAAP20Q6NZ36 180 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 RPL22L1Q6P5R6 122 aaKnown RBP6.81□□□□□ -1.32
GPC6-202ENST00000617456 CNIH2Q6PI25 160 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 TMEM91Q6ZNR0 172 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 RNF144BQ7Z419 303 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 CENPVQ7Z7K6 275 aaPredicted RBP6.81□□□□□ -1.32
GPC6-202ENST00000617456 OR51T1Q8NGJ9 327 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 OR5AK2Q8NH90 309 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 RNF141Q8WVD5 230 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 TMEM106AQ96A25 262 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 MGLLQ99685 303 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 GPN1Q9HCN4 374 aaPredicted RBP6.81□□□□□ -1.32
GPC6-202ENST00000617456 FGF20Q9NP95 211 aaPredicted RBP6.81□□□□□ -1.32
GPC6-202ENST00000617456 RPS10P5Q9NQ39 176 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 DPM3Q9P2X0 92 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 OR51B2Q9Y5P1 312 aa6.81□□□□□ -1.32
GPC6-202ENST00000617456 TSSC4Q9Y5U2 329 aaPredicted RBP6.81□□□□□ -1.32
GPC6-202ENST00000617456 STAB2Q8WWQ8 2551 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 F2RL2O00254 374 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 DUS4LO95620 317 aaKnown RBP6.8□□□□□ -1.32
GPC6-202ENST00000617456 OR2H2O95918 312 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 RLN1P04808 185 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 OR5G3P0C626 314 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 PGAM2P15259 253 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 BCL3P20749 454 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 FGF9P31371 208 aaPredicted RBP6.8□□□□□ -1.32
GPC6-202ENST00000617456 PIGPP57054 158 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 RUNX1Q01196 453 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 EGFEM1PQ0D2K5 195 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 RAB32Q13637 225 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 IL13RA2Q14627 380 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 SSX1Q16384 188 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 ZNF57Q68EA5 555 aaPredicted RBP6.8□□□□□ -1.32
GPC6-202ENST00000617456 Q6P435 159 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 TCF23Q7RTU1 214 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 LINC00596Q86U02 117 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 ABHD12Q8N2K0 398 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 GPR148Q8TDV2 347 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 C15orf40Q8WUR7 153 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 NUDCD2Q8WVJ2 157 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 ACY3Q96HD9 319 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 RNF167Q9H6Y7 350 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 NDUFB11Q9NX14 153 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 IL36GQ9NZH8 169 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 DHDHQ9UQ10 334 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 C14orf166Q9Y224 244 aaKnown RBP6.8□□□□□ -1.32
GPC6-202ENST00000617456 HILPDAQ9Y5L2 63 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 U3KQK5 164 aa6.8□□□□□ -1.32
GPC6-202ENST00000617456 DYNC2H1Q8NCM8 4307 aaKnown RBP6.8□□□□□ -1.32
GPC6-202ENST00000617456 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.79□□□□□ -1.32
GPC6-202ENST00000617456 IGKV1-12A0A0C4DH73 117 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 KBTBD11-OT1A0A1B0GTJ5 212 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 ODAMA1E959 279 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 DEGS1O15121 323 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 CTDSPLO15194 276 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 GSTZ1O43708 216 aaPredicted RBP6.79□□□□□ -1.32
GPC6-202ENST00000617456 LANCL1O43813 399 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 IGKV1D-12P01611 117 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms