RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CTLA4P16410 223 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM106AQ4KMX7 169 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 ARPC1AQ92747 370 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 NPVFQ9HCQ7 196 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 C9JCJ5 164 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 C1orf210Q8IVY1 113 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 RPP21Q9H633 154 aaKnown RBP4.22□□□□□ -1.73
VPS13D-213ENST00000613099 YPEL1O60688 119 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 ZFAND5O76080 213 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 NDUFV3P56181 108 aaKnown RBP4.22□□□□□ -1.73
VPS13D-213ENST00000613099 SLC25A48Q6ZT89 311 aaKnown RBP4.22□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF784Q8NCA9 323 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-213ENST00000613099 YPEL2Q96QA6 119 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 NPCDR1Q9BY65 106 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 CCL28Q9NRJ3 127 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 RAXQ9Y2V3 346 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 hDV102S1A0JD36 115 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A10PA6NDY2 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A18PA6NE21 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A16PA6NEW6 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A20PA6NIJ5 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A8PA6NJQ4 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A7PA6NKC0 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A22PA8MWA6 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A12PA8MX19 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A5PA8MXJ8 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A23PA8MXZ1 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 F2RL2O00254 374 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 KLKB1P03952 638 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A15PP0C7V4 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A13PP0C7W8 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A14PP0C7W9 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 FAM90A24PP0C7X0 464 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 CD40P25942 277 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 KLF16Q9BXK1 252 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF319Q9P2F9 582 aa4.22□□□□□ -1.73
VPS13D-213ENST00000613099 RPL30P62888 115 aaKnown RBP4.22□□□□□ -1.73
VPS13D-213ENST00000613099 GGTLC3B5MD39 225 aa4.21□□□□□ -1.73
VPS13D-213ENST00000613099 C8orf88P0DMB2 117 aa4.21□□□□□ -1.73
VPS13D-213ENST00000613099 PCNX2A6NKB5 2137 aa4.21□□□□□ -1.73
VPS13D-213ENST00000613099 OR2H2O95918 312 aa4.21□□□□□ -1.73
VPS13D-213ENST00000613099 ZGLP1P0C6A0 271 aa4.21□□□□□ -1.73
VPS13D-213ENST00000613099 TEX48A0A1B0GUV7 120 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 LEPP41159 167 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 ZNF355PQ9NSJ1 428 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 ATP6V0E2Q8NHE4 81 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 PDFQ9HBH1 243 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 PRSS8Q16651 343 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 R4GN57 208 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 NACAE9PAV3 2078 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 hCG_38984A0A1B0GV85 526 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 HBDP02042 147 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 C2orf82Q6UX34 121 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 RPRMLQ8N4K4 120 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 OR4C3Q8NH37 302 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 MRPL32Q9BYC8 188 aaKnown RBP4.21□□□□□ -1.74
VPS13D-213ENST00000613099 ZNF525Q8N782 197 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 ZNF114Q8NC26 417 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 FCGR2BP31994 310 aaPredicted RBP4.21□□□□□ -1.74
VPS13D-213ENST00000613099 EMDP50402 254 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 MIC13Q5XKP0 118 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 DUX4L9Q6RFH8 374 aaPredicted RBP4.21□□□□□ -1.74
VPS13D-213ENST00000613099 DNAJC25-GNG10A0A024R161 153 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 PLNP26678 52 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 THADAQ6YHU6 1953 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 FBXL15Q9H469 300 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 IFI27L1Q96BM0 104 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 TAX1BP3O14907 124 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 RPS27P42677 84 aaKnown RBP4.21□□□□□ -1.74
VPS13D-213ENST00000613099 NXT2Q9NPJ8 142 aaKnown RBP4.21□□□□□ -1.74
VPS13D-213ENST00000613099 FOXI2Q6ZQN5 318 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 KISS1RQ969F8 398 aaPredicted RBP4.21□□□□□ -1.74
VPS13D-213ENST00000613099 RNF183Q96D59 192 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 NAA38Q9BRA0 125 aaKnown RBP4.21□□□□□ -1.74
VPS13D-213ENST00000613099 ABHD14AQ9BUJ0 271 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 EPDR1Q9UM22 224 aa4.21□□□□□ -1.74
VPS13D-213ENST00000613099 SAP30O75446 220 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 AMN1Q8IY45 258 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 CTSBP07858 339 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 PRSS41Q7RTY9 318 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 OVOL2Q9BRP0 275 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 FZR1Q9UM11 496 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-213ENST00000613099 CEACAM18A8MTB9 384 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 ACYP1P07311 99 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 FXYD3Q14802 87 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 TAL2Q16559 108 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 SAA2-SAA4A0A096LPE2 208 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 TMEM14DPA8MWL7 114 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 IQCF6A8MYZ5 107 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 TNXAQ16473 311 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 STPG3Q8N7X2 389 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 WBP1Q96G27 269 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 C2orf16Q68DN1 1984 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 CLDN14O95500 239 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 IGKCP01834 107 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 CMC4P56277 68 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-213ENST00000613099 HOXA4Q00056 320 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-213ENST00000613099 A4D1N5 150 aa4.2□□□□□ -1.74
VPS13D-213ENST00000613099 SPRY1O43609 319 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms