RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 CACNA1EQ15878 2313 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 CEP192Q8TEP8 1941 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 M0R1X1 148 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 WISP2O76076 250 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 TMEM11P17152 192 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 PSG9Q00887 426 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 OR1C1Q15619 314 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 ZNF841Q6ZN19 808 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 Q8IYB0 196 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 DEFB125Q8N687 156 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 MEGF9Q9H1U4 602 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 SAP30LQ9HAJ7 183 aa10.26□□□□□ -0.77
CDCA3-212ENST00000604599 TNCP24821 2201 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 PINLYPA6NC86 204 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 C2CD4DB7Z1M9 353 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 K7ERU9 68 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 SAP30O75446 220 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 PI4KAP42356 2102 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 TMPRSS3P57727 454 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 ALKBH6Q3KRA9 238 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 Q6ZR03 302 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 LINC00173Q6ZV60 143 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 COQ2Q96H96 371 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 ZNF826PQ6ZT77 177 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 FAM214BQ7L5A3 538 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 DCTN5Q9BTE1 182 aa10.25□□□□□ -0.77
CDCA3-212ENST00000604599 TRAV8-6A0A0B4J262 113 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 OR13A1Q8NGR1 328 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 ZNF503Q96F45 646 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 MCRIP2Q9BUT9 160 aaKnown RBP10.24□□□□□ -0.77
CDCA3-212ENST00000604599 RPH3ALQ9UNE2 315 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 TCF19Q9Y242 345 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 PROP1O75360 226 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 KLF7O75840 302 aaPredicted RBP10.24□□□□□ -0.77
CDCA3-212ENST00000604599 ARR3P36575 388 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 RAB31Q13636 194 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 SLC25A34Q6PIV7 304 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 WDR31Q8NA23 367 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 IGF2BP2-AS1Q96M15 143 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 TMEM167BQ9NRX6 74 aa10.24□□□□□ -0.77
CDCA3-212ENST00000604599 H0Y8G0 127 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 CD24P25063 80 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 DUTP33316 252 aaKnown RBP10.23□□□□□ -0.77
CDCA3-212ENST00000604599 GPR12P47775 334 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 PPOXP50336 477 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 ERVK-16P61578 105 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 CLEC2AQ6UVW9 174 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 MOB3BQ86TA1 216 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 NUP35Q8NFH5 326 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 SARAFQ96BY9 339 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 NABP2Q9BQ15 211 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 HINT2Q9BX68 163 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 LINC00470Q9BZP3 86 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 WDR54Q9H977 334 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 ST20Q9HBF5 79 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 A0A087X0K7 114 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
CDCA3-212ENST00000604599 RPS20P60866 119 aaKnown RBP10.23□□□□□ -0.77
CDCA3-212ENST00000604599 PRR20EP86478 221 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 PRR20CP86479 221 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 PRR20DP86480 221 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 PRR20BP86481 221 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 PRR20AP86496 221 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 URB1-AS1Q96HZ7 61 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 TMEM140Q9NV12 185 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 CORTO00230 105 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 RPL39P5Q59GN2 51 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 TRAT1Q6PIZ9 186 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 METRNQ9UJH8 293 aa10.23□□□□□ -0.77
CDCA3-212ENST00000604599 PRR14LQ5THK1 2151 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 CELA3AP09093 270 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 FAM120AOSQ5T036 256 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 SLC35E4Q6ICL7 350 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 TRIB1Q96RU8 372 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 IGKV3D-15A0A087WSY6 115 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 MYOD1P15172 320 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 KLF5Q13887 457 aaPredicted RBP10.22□□□□□ -0.77
CDCA3-212ENST00000604599 EDDM3AQ14507 147 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 C12orf54Q6X4T0 127 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 SNRNP40Q96DI7 357 aaKnown RBP10.22□□□□□ -0.77
CDCA3-212ENST00000604599 SMIM12Q96EX1 92 aa10.22□□□□□ -0.77
CDCA3-212ENST00000604599 SYS1-DBNDD2H3BUS1 97 aa10.21□□□□□ -0.77
CDCA3-212ENST00000604599 WIPF2Q8TF74 440 aaPredicted RBP10.21□□□□□ -0.77
CDCA3-212ENST00000604599 COMMD5Q9GZQ3 224 aa10.21□□□□□ -0.77
CDCA3-212ENST00000604599 C12orf49Q9H741 205 aa10.21□□□□□ -0.77
CDCA3-212ENST00000604599 SLC25A10Q9UBX3 287 aaPredicted RBP10.21□□□□□ -0.77
CDCA3-212ENST00000604599 DUSP13Q9UII6 198 aa10.21□□□□□ -0.77
CDCA3-212ENST00000604599 PRRC2CQ9Y520 2896 aaKnown RBP10.21□□□□□ -0.78
CDCA3-212ENST00000604599 HIGD1CA8MV81 97 aa10.21□□□□□ -0.78
CDCA3-212ENST00000604599 CER1O95813 267 aa10.21□□□□□ -0.78
CDCA3-212ENST00000604599 SP1P08047 785 aa10.21□□□□□ -0.78
CDCA3-212ENST00000604599 MDP1Q86V88 176 aa10.21□□□□□ -0.78
CDCA3-212ENST00000604599 WFDC8Q8IUA0 241 aa10.21□□□□□ -0.78
CDCA3-212ENST00000604599 PMCHL2Q9BQD1 86 aa10.21□□□□□ -0.78
CDCA3-212ENST00000604599 TIMM8BQ9Y5J9 83 aaPredicted RBP10.21□□□□□ -0.78
CDCA3-212ENST00000604599 C21orf140B9A014 251 aa10.2□□□□□ -0.78
CDCA3-212ENST00000604599 HSBP1L1C9JCN9 74 aa10.2□□□□□ -0.78
CDCA3-212ENST00000604599 LTBRP36941 435 aa10.2□□□□□ -0.78
CDCA3-212ENST00000604599 GABRA6Q16445 453 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms