RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 CES1P1Q9UKY3 287 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 TMCC3Q9ULS5 477 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 TMCO1Q9UM00 188 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 ST3GAL6Q9Y274 331 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 RCL1Q9Y2P8 373 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 POLDIP2Q9Y2S7 368 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 ACOT9Q9Y305 439 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 LRRC42Q9Y546 428 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 MPC1Q9Y5U8 109 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 SOX21Q9Y651 276 aaPredicted RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 IGHV3OR15-7A0A075B7D8 119 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 IGKV1D-8A0A087WSZ0 117 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 TRGV10A0A0A0MS01 117 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 IGHV3-21A0A0B4J1V1 117 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 A0A0G2JQZ4 141 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 LOC107986453A0A1B0GWG9 222 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 FAM230AA0A1W2PPH8 454 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 ZNF860A6NHJ4 632 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 FAM74A7A6NL05 159 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 OR2AT4A6NND4 320 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 NCBP2LA6PVI3 153 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 XRCC2O43543 280 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 RNF13O43567 381 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 GSTZ1O43708 216 aaPredicted RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 NUPR1O60356 82 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 SLC16A7O60669 478 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 MTX2O75431 263 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 NDUFA3O95167 84 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 OR5F1O95221 314 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 LRATO95237 230 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 IGKV1D-12P01611 117 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 IGHV3-7P01780 117 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 MT-ND6P03923 174 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 CLPSP04118 112 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 TCRBP04435 133 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 KRT8P05787 483 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 PTHLHP12272 177 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 HLA-GP17693 338 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 CCNOP22674 350 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 IMPA1P29218 277 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 PPP1CCP36873 323 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 HTR2BP41595 481 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 OMPP47874 163 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 SERPINB9P50453 376 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 DAP3P51398 398 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 ZNF140P52738 457 aaPredicted RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 ATP1B3P54709 279 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 AQP5P55064 265 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 FGF8P55075 233 aaPredicted RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 DLX6P56179 175 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 CLDN12P56749 244 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 COPZ1P61923 177 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 LSM6P62312 80 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 SNRPD3P62318 126 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 ACTG2P63267 376 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 RBM3P98179 157 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 FOXF1Q12946 379 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 TPBGQ13641 420 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 LASP1Q14847 261 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 QPRTQ15274 297 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 FAM74A3Q4VXF1 159 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 SAMD4BQ5PRF9 694 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 RBM48Q5RL73 367 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 HHATQ5VTY9 493 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 NOXRED1Q6NXP6 359 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 SLC48A1Q6P1K1 146 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 MED27Q6P2C8 311 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 ULK3Q6PHR2 472 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 SDIM1Q6ZPB5 146 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 LRRC74BQ6ZQY2 392 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 CENPQQ7L2Z9 268 aaPredicted RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 DPY19L4Q7Z388 723 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 FAM19A3Q7Z5A8 133 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 NUDCD3Q8IVD9 361 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 SYCE1Q8N0S2 351 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 OR2L13Q8N349 312 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 C3orf22Q8N5N4 141 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 ZNF676Q8N7Q3 588 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 INO80EQ8NBZ0 244 aaPredicted RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 CHST4Q8NCG5 386 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 TMEM185AQ8NFB2 350 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 OR11H7Q8NGC8 314 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 OR4K2Q8NGD2 314 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 OR52K1Q8NGK4 314 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 OR10A6Q8NH74 314 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 OR1F12Q8NHA8 337 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 COQ8AQ8NI60 647 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 STAG3L4Q8TBR4 150 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 RNASE8Q8TDE3 154 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 FAM172AQ8WUF8 416 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 NAT14Q8WUY8 206 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 SKA2Q8WVK7 121 aaPredicted RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 SPRYD4Q8WW59 207 aaPredicted RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 GEMIN6Q8WXD5 167 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 LEAP2Q969E1 77 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 EEF1AKMT3Q96AZ1 226 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 DNAJC19Q96DA6 116 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 DGCR14Q96DF8 476 aaKnown RBP0.16□□□□□ -2.38
CEP290-208ENST00000604024 SNF8Q96H20 258 aa0.16□□□□□ -2.38
CEP290-208ENST00000604024 BTF3L4Q96K17 158 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms