RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PRR25Q96S07 402 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 B9D2Q9BPU9 175 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 NAA60Q9H7X0 242 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 FBXL7Q9UJT9 491 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 ZNF256Q9Y2P7 627 aaPredicted RBP6.68□□□□□ -1.34
SSBP4-208ENST00000600628 TEX13DA0A0J9YY54 714 aaPredicted RBP6.67□□□□□ -1.34
SSBP4-208ENST00000600628 ANKRD34BA5PLL1 514 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 SAP30O75446 220 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 HLA-AP01891 365 aaKnown RBP6.67□□□□□ -1.34
SSBP4-208ENST00000600628 REG1AP05451 166 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 C8orf88P0DMB2 117 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 OR13C7P0DN81 318 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 PGAM2P15259 253 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 SYNJ2BPP57105 145 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 DHODHQ02127 395 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 TMEM187Q14656 261 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 IZUMO4Q1ZYL8 232 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 SP6Q3SY56 376 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 SCGB2B2Q4G0G5 96 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 LINC00299Q6ZSB3 139 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 H2BFWTQ7Z2G1 175 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 FAM219AQ8IW50 185 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 SELENOHQ8IZQ5 122 aaKnown RBP6.67□□□□□ -1.34
SSBP4-208ENST00000600628 Q8N1Y9 231 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 CCDC71LQ8N9Z2 235 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 OR1P1Q8NH06 330 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 IL22RA2Q969J5 263 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 CXorf58Q96LI9 332 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 OR4C12Q96R67 309 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 ZNF436Q9C0F3 470 aaPredicted RBP6.67□□□□□ -1.34
SSBP4-208ENST00000600628 ZC4H2Q9NQZ6 224 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 PTTG2Q9NZH5 202 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 COPZ2Q9P299 210 aa6.67□□□□□ -1.34
SSBP4-208ENST00000600628 A8MZ25 164 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 PPP5D1E7EU14 171 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 I3L2K1 104 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 GGCTO75223 188 aaKnown RBP6.66□□□□□ -1.34
SSBP4-208ENST00000600628 SNAPC5O75971 98 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 OR5AC1P0C628 307 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 SPNP16150 400 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 S100A5P33763 92 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 ADMP35318 185 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 CD69Q07108 199 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 BAK1Q16611 211 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 RPEL1Q2QD12 228 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 CNPY1Q3B7I2 92 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 NMSQ5H8A3 153 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 OR1L6Q8NGR2 347 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 OR52E5Q8NH55 327 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 RBPMSQ93062 196 aaKnown RBP6.66□□□□□ -1.34
SSBP4-208ENST00000600628 ELOVL1Q9BW60 279 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 SCP2D1Q9UJQ7 156 aa6.66□□□□□ -1.34
SSBP4-208ENST00000600628 KMT2CQ8NEZ4 4911 aaKnown RBP6.65□□□□□ -1.34
SSBP4-208ENST00000600628 TMEM213A2RRL7 107 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 CCDC160A6NGH7 325 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 ST8SIA3O43173 380 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 LY86O95711 162 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 CLEC3BP05452 202 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 CTSGP08311 255 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 BTCP35070 178 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 AP3S2P59780 193 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 TATDN3Q17R31 274 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 PYDC2Q56P42 97 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 SPANXN2Q5MJ10 180 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 CLEC19AQ6UXS0 136 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 LRTM2Q8N967 370 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 OR2K2Q8NGT1 345 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 OR4A16Q8NH70 328 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 SCARB1Q8WTV0 552 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 EEF1AKMT3Q96AZ1 226 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 THYN1Q9P016 225 aa6.65□□□□□ -1.34
SSBP4-208ENST00000600628 C14orf166Q9Y224 244 aaKnown RBP6.65□□□□□ -1.34
SSBP4-208ENST00000600628 A0A0B4J2A0 478 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 C2orf70A6NJV1 201 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 ATG12O94817 140 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 OR2C1O95371 312 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 NHLRC4P0CG21 123 aaPredicted RBP6.64□□□□□ -1.35
SSBP4-208ENST00000600628 RNASE2P10153 161 aaKnown RBP6.64□□□□□ -1.35
SSBP4-208ENST00000600628 DEFA4P12838 97 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 GP9P14770 177 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 EDN2P20800 178 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 ARL3P36405 182 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 ELLP55199 621 aaPredicted RBP6.64□□□□□ -1.35
SSBP4-208ENST00000600628 DEFB114Q30KQ6 69 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 TMEM128Q5BJH2 165 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 C11orf87Q6NUJ2 197 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 SPSB3Q6PJ21 355 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 UNQ9165/PRO28630Q6UXU0 137 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 TOMM5Q8N4H5 51 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 TMEM170AQ8WVE7 144 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 GPR146Q96CH1 333 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 BSCL2Q96G97 398 aaPredicted RBP6.64□□□□□ -1.35
SSBP4-208ENST00000600628 SCGB3A2Q96PL1 93 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 SLC25A21Q9BQT8 299 aaPredicted RBP6.64□□□□□ -1.35
SSBP4-208ENST00000600628 CHRDL1Q9BU40 450 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 PEMTQ9UBM1 199 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 SHPKQ9UHJ6 478 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 SMAD5-AS1Q9Y6J3 95 aa6.64□□□□□ -1.35
SSBP4-208ENST00000600628 IZUMO1RA6ND01 250 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 ZNF785A8K8V0 405 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms