RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 OR4A47Q6IF82 309 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 SLC16A13Q7RTY0 426 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 GPHB5Q86YW7 130 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 SPAG16Q8N0X2 631 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 OR5H2Q8NGV7 314 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 ZNF431Q8TF32 576 aaPredicted RBP8.66□□□□□ -1.02
HIF3A-217ENST00000600236 ASB13Q8WXK3 278 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 ZNF486Q96H40 463 aaPredicted RBP8.66□□□□□ -1.02
HIF3A-217ENST00000600236 CXorf58Q96LI9 332 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 SEC22CQ9BRL7 303 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 CCL28Q9NRJ3 127 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 THYN1Q9P016 225 aa8.66□□□□□ -1.02
HIF3A-217ENST00000600236 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 LCE6AA0A183 80 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 C2orf70A6NJV1 201 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 SSNA1O43805 119 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 OR2C1O95371 312 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 HPRT1P00492 218 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 RLN1P04808 185 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 IL6RP08887 468 aaPredicted RBP8.65□□□□□ -1.02
HIF3A-217ENST00000600236 GIPP09681 153 aaPredicted RBP8.65□□□□□ -1.02
HIF3A-217ENST00000600236 FOLR2P14207 255 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 NQO2P16083 231 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 CTRB1P17538 263 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 CXCL3P19876 107 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 TAS2R31P59538 309 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 FXYD4P59646 89 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 SURF2Q15527 256 aaPredicted RBP8.65□□□□□ -1.02
HIF3A-217ENST00000600236 DEFB114Q30KQ6 69 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 CTRB2Q6GPI1 263 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 THOC7Q6I9Y2 204 aaKnown RBP8.65□□□□□ -1.02
HIF3A-217ENST00000600236 CLEC19AQ6UXS0 136 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 TMEM17Q86X19 198 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 ZBTB8BQ8NAP8 495 aaPredicted RBP8.65□□□□□ -1.02
HIF3A-217ENST00000600236 OR5AP2Q8NGF4 316 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 TERB2Q8NHR7 220 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 CD300LFQ8TDQ1 290 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 SRSF8Q9BRL6 282 aaKnown RBP8.65□□□□□ -1.02
HIF3A-217ENST00000600236 COMMD5Q9GZQ3 224 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 SLC5A7Q9GZV3 580 aa8.65□□□□□ -1.02
HIF3A-217ENST00000600236 HUWE1Q7Z6Z7 4374 aaKnown RBP8.64□□□□□ -1.03
HIF3A-217ENST00000600236 RYR3Q15413 4870 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 ZNF320A2RRD8 509 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 OR11H12B2RN74 326 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 NDUFB8O95169 186 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 HLA-AP01891 365 aaKnown RBP8.64□□□□□ -1.03
HIF3A-217ENST00000600236 PMP2P02689 132 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 OR4E1P0C645 316 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 AREGP15514 252 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 NKX2-5P52952 324 aaPredicted RBP8.64□□□□□ -1.03
HIF3A-217ENST00000600236 HERV-K104P61576 105 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 ERVK-16P61578 105 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 SCGB2B2Q4G0G5 96 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 AADACL3Q5VUY0 350 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 DMBX1Q8NFW5 382 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 ZFAND1Q8TCF1 268 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 HYLS1Q96M11 299 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 CCDC140Q96MF4 163 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 SCGB3A2Q96PL1 93 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 FANCD2OSQ96PS1 177 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 ZNF436Q9C0F3 470 aaPredicted RBP8.64□□□□□ -1.03
HIF3A-217ENST00000600236 SRD5A3Q9H8P0 318 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 ZC4H2Q9NQZ6 224 aa8.64□□□□□ -1.03
HIF3A-217ENST00000600236 IGLV11-55A0A075B6I3 123 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 ZNF785A8K8V0 405 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 A8MWP6 167 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 E7EUB6 86 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 FGF2P09038 288 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 CD7P09564 240 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 CBLN1P23435 193 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 BRWD1-AS2P59051 145 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 RAP2BP61225 183 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 DHODHQ02127 395 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 POU2AF1Q16633 256 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 KLK9Q2XQG4 91 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 ADAMTSL5Q6ZMM2 481 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
HIF3A-217ENST00000600236 HSD17B13Q7Z5P4 300 aaPredicted RBP8.63□□□□□ -1.03
HIF3A-217ENST00000600236 LYG2Q86SG7 212 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 DEFB125Q8N687 156 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 MARC2Q969Z3 335 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 GPHA2Q96T91 129 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 HIPK2Q9H2X6 1198 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 PLEKHA2Q9HB19 425 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 EHFQ9NZC4 300 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 COMMD9Q9P000 198 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 MGAT4CQ9UBM8 478 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 KLK9Q9UKQ9 250 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 GPR132Q9UNW8 380 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 DMRT1Q9Y5R6 373 aa8.63□□□□□ -1.03
HIF3A-217ENST00000600236 A0A0B4J2A0 478 aa8.62□□□□□ -1.03
HIF3A-217ENST00000600236 G3V3Q6 166 aa8.62□□□□□ -1.03
HIF3A-217ENST00000600236 UPK2O00526 184 aa8.62□□□□□ -1.03
HIF3A-217ENST00000600236 RGS13O14921 159 aa8.62□□□□□ -1.03
HIF3A-217ENST00000600236 JTBO76095 146 aa8.62□□□□□ -1.03
HIF3A-217ENST00000600236 REG1AP05451 166 aa8.62□□□□□ -1.03
HIF3A-217ENST00000600236 OR2B8PP59922 312 aa8.62□□□□□ -1.03
HIF3A-217ENST00000600236 DHRS2Q13268 280 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms