RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 MARCH1Q8TCQ1 289 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 SCARB1Q8WTV0 552 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 WDR89Q96FK6 387 aaPredicted RBP9.14□□□□□ -0.95
LIG1-217ENST00000599165 ZNF486Q96H40 463 aaPredicted RBP9.14□□□□□ -0.95
LIG1-217ENST00000599165 RCHY1Q96PM5 261 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 RTBDNQ9BSG5 229 aaPredicted RBP9.14□□□□□ -0.95
LIG1-217ENST00000599165 CHRDL1Q9BU40 450 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 HINT2Q9BX68 163 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 ZNF436Q9C0F3 470 aaPredicted RBP9.14□□□□□ -0.95
LIG1-217ENST00000599165 WFDC10AQ9H1F0 79 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 STARD9Q9P2P6 4700 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 SACSQ9NZJ4 4579 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 TGOLN2O43493 480 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 SNAPC5O75971 98 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 IFNA6P05013 189 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 PGAM2P15259 253 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 MRPS10P82664 201 aaKnown RBP9.13□□□□□ -0.95
LIG1-217ENST00000599165 PRCDQ00LT1 54 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 SSBP1Q04837 148 aaKnown RBP9.13□□□□□ -0.95
LIG1-217ENST00000599165 SP6Q3SY56 376 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 SLC25A24Q6NUK1 477 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 TMEM61Q8N0U2 210 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 OR4C16Q8NGL9 310 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 LHFPL5Q8TAF8 219 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 C15orf40Q8WUR7 153 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 DIRAS2Q96HU8 199 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 TSC22D3Q99576 134 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 C5orf66Q9H5L9 145 aa9.13□□□□□ -0.95
LIG1-217ENST00000599165 C3orf85A0A1B0GTC6 90 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 OR2T8A6NH00 312 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 I3L2K1 104 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 GSTZ1O43708 216 aaPredicted RBP9.12□□□□□ -0.95
LIG1-217ENST00000599165 CTSDP07339 412 aaPredicted RBP9.12□□□□□ -0.95
LIG1-217ENST00000599165 UCP1P25874 307 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 S100GP29377 79 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 TNFSF8P32971 234 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 HSPE1P61604 102 aaKnown RBP9.12□□□□□ -0.95
LIG1-217ENST00000599165 SCGB2B2Q4G0G5 96 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 SPINK9Q5DT21 86 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 PVRIGQ6DKI7 326 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 Q6ZRM9 215 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 H2BFWTQ7Z2G1 175 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 SGPP2Q8IWX5 399 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 UXS1Q8NBZ7 420 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 ZNF114Q8NC26 417 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 OR1P1Q8NH06 330 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 TMEM190Q8WZ59 177 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 RBM38Q9H0Z9 239 aaKnown RBP9.12□□□□□ -0.95
LIG1-217ENST00000599165 PLEKHA3Q9HB20 300 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 FKBP11Q9NYL4 201 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 C21orf62Q9NYP8 219 aa9.12□□□□□ -0.95
LIG1-217ENST00000599165 TECRQ9NZ01 308 aaKnown RBP9.12□□□□□ -0.95
LIG1-217ENST00000599165 ANKRD20A5PA0PJZ0 165 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 ZNF320A2RRD8 509 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 CTSGP08311 255 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 IL18Q14116 193 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 HAGHQ16775 308 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 FAM106AQ4KMX7 169 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 PLET1Q6UQ28 207 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 BTNL8Q6UX41 500 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 DYNLRB2Q8TF09 96 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 GLYATL2Q8WU03 294 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 TMEM230Q96A57 120 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 TMEM56Q96MV1 263 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 NEURL2Q9BR09 285 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 C6orf62Q9GZU0 229 aaPredicted RBP9.11□□□□□ -0.95
LIG1-217ENST00000599165 THYN1Q9P016 225 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 GPR132Q9UNW8 380 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 RYR2Q92736 4967 aa9.11□□□□□ -0.95
LIG1-217ENST00000599165 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 RBMY1BA6NDE4 496 aaKnown RBP9.1□□□□□ -0.95
LIG1-217ENST00000599165 RBMY1EA6NEQ0 496 aaKnown RBP9.1□□□□□ -0.95
LIG1-217ENST00000599165 INS-IGF2F8WCM5 200 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 ST8SIA3O43173 380 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 IGHV3-48P01763 117 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 OR5AC1P0C628 307 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 RBMY1DP0C7P1 496 aaKnown RBP9.1□□□□□ -0.95
LIG1-217ENST00000599165 AKAIN1P0CW23 69 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 CD81P60033 236 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 MEF2DQ14814 521 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 AARDQ4LEZ3 155 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 GTSCR1Q86UQ5 136 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 DEFB125Q8N687 156 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 OR4A16Q8NH70 328 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 ZFAND1Q8TCF1 268 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 BSCL2Q96G97 398 aaPredicted RBP9.1□□□□□ -0.95
LIG1-217ENST00000599165 ATP6V0BQ99437 205 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 EDA2RQ9HAV5 297 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 SLC2A8Q9NY64 477 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 V9GYH0 126 aa9.1□□□□□ -0.95
LIG1-217ENST00000599165 IGHV3OR16-8A0A075B7F1 116 aa9.09□□□□□ -0.95
LIG1-217ENST00000599165 CDS2O95674 445 aa9.09□□□□□ -0.95
LIG1-217ENST00000599165 MT-CO2P00403 227 aa9.09□□□□□ -0.95
LIG1-217ENST00000599165 FCGR2BP31994 310 aaPredicted RBP9.09□□□□□ -0.95
LIG1-217ENST00000599165 ELLP55199 621 aaPredicted RBP9.09□□□□□ -0.95
LIG1-217ENST00000599165 SURF2Q15527 256 aaPredicted RBP9.09□□□□□ -0.95
LIG1-217ENST00000599165 GUCA2BQ16661 112 aa9.09□□□□□ -0.95
LIG1-217ENST00000599165 ZNF57Q68EA5 555 aaPredicted RBP9.09□□□□□ -0.95
LIG1-217ENST00000599165 CCDC71LQ8N9Z2 235 aa9.09□□□□□ -0.95
LIG1-217ENST00000599165 OR51S1Q8NGJ8 323 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms