RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 OR2C1O95371 312 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 CDS2O95674 445 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 ARL3P36405 182 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 MECP2P51608 486 aaKnown RBP8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 AKR1C2P52895 323 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 TRIM16LQ309B1 348 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 SPINK9Q5DT21 86 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 FAM209BQ5JX69 171 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 Q6ZRM9 215 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 OR4A16Q8NH70 328 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 CXorf58Q96LI9 332 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 TMEM56Q96MV1 263 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 SRRQ9GZT4 340 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 MCUBQ9NWR8 336 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 SIGLEC8Q9NYZ4 499 aa8.35□□□□□ -1.07
SHKBP1-206ENST00000595523 HUWE1Q7Z6Z7 4374 aaKnown RBP8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 TRBV7-1A0A0A6YYK4 115 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 IGHV3-21A0A0B4J1V1 117 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 TEX13DA0A0J9YY54 714 aaPredicted RBP8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 F8W735 103 aaPredicted RBP8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 K7EIM0 57 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 ST8SIA3O43173 380 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 B3GALNT1O75752 331 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 LY86O95711 162 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 CLEC3BP05452 202 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 GP9P14770 177 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 GPR183P32249 361 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 HSPE1P61604 102 aaKnown RBP8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 SUPT4H1P63272 117 aaKnown RBP8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 SLC25A24Q6NUK1 477 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 SELENOHQ8IZQ5 122 aaKnown RBP8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 TOMM5Q8N4H5 51 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 OR2C3Q8N628 320 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 ZNF114Q8NC26 417 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 OR1P1Q8NH06 330 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 VN1R17PQ8TDU5 208 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 ZNF414Q96IQ9 312 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 SDHCQ99643 169 aaPredicted RBP8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 B9D2Q9BPU9 175 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 ZC4H2Q9NQZ6 224 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 PRR13Q9NZ81 148 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 SCP2D1Q9UJQ7 156 aa8.34□□□□□ -1.07
SHKBP1-206ENST00000595523 IZUMO1RA6ND01 250 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 C2orf70A6NJV1 201 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 LGALS9O00182 355 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 ATG12O94817 140 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 TMEM187Q14656 261 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 BAK1Q16611 211 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 TATDN3Q17R31 274 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 AARDQ4LEZ3 155 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 SPANXN2Q5MJ10 180 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 UNQ9165/PRO28630Q6UXU0 137 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 GPHB5Q86YW7 130 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 SCARB1Q8WTV0 552 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 RBPMSQ93062 196 aaKnown RBP8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 GALNT14Q96FL9 552 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 THYN1Q9P016 225 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 PEMTQ9UBM1 199 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 TMEM56-RWDD3S4R434 201 aa8.33□□□□□ -1.08
SHKBP1-206ENST00000595523 TMEM213A2RRL7 107 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 A8MWP6 167 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 INS-IGF2F8WCM5 200 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 I3L2K1 104 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 ADMP35318 185 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 FAUP35544 74 aaKnown RBP8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 AP3S2P59780 193 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 DHODHQ02127 395 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 TMEM268Q5VZI3 342 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 FAM219AQ8IW50 185 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 SGPP2Q8IWX5 399 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 Q8N1Y9 231 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 SLC35G3Q8N808 338 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 CACNG8Q8WXS5 425 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 RRNAD1Q96FB5 475 aaKnown RBP8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 CHRDL1Q9BU40 450 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 PLEKHA3Q9HB20 300 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 C21orf62Q9NYP8 219 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 NDUFA13Q9P0J0 144 aa8.32□□□□□ -1.08
SHKBP1-206ENST00000595523 IGHV3-35A0A0C4DH35 117 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 OR2T8A6NH00 312 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 CYB5BO43169 146 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 TGOLN2O43493 480 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 FOLR2P14207 255 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 AKR1C4P17516 323 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 DCTN2Q13561 401 aaKnown RBP8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 PVRIGQ6DKI7 326 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 C11orf87Q6NUJ2 197 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 OR1L6Q8NGR2 347 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 DEDD2Q8WXF8 326 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 GPR146Q96CH1 333 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 SCGB3A2Q96PL1 93 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 ZNF436Q9C0F3 470 aaPredicted RBP8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 CACNG5Q9UF02 275 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 SELENOKQ9Y6D0 94 aa8.31□□□□□ -1.08
SHKBP1-206ENST00000595523 MT-CO2P00403 227 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 IFNA17P01571 189 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 IGHV3-48P01763 117 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 RNASE2P10153 161 aaKnown RBP8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 CBLN1P23435 193 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 CD69Q07108 199 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms