RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 RBMY1A1P0DJD3 496 aaKnown RBP14.26□□□□□ -0.13
PRKCSH-216ENST00000592445 RBMY1CP0DJD4 496 aa14.26□□□□□ -0.13
PRKCSH-216ENST00000592445 RBMY1FQ15415 496 aaKnown RBP14.26□□□□□ -0.13
PRKCSH-216ENST00000592445 OGFRL1Q5TC84 451 aaPredicted RBP14.26□□□□□ -0.13
PRKCSH-216ENST00000592445 PVRIGQ6DKI7 326 aa14.26□□□□□ -0.13
PRKCSH-216ENST00000592445 OR51H1Q8NH63 302 aa14.26□□□□□ -0.13
PRKCSH-216ENST00000592445 LSM10Q969L4 123 aaKnown RBP14.26□□□□□ -0.13
PRKCSH-216ENST00000592445 SLC5A7Q9GZV3 580 aa14.26□□□□□ -0.13
PRKCSH-216ENST00000592445 VCXQ9H320 206 aa14.26□□□□□ -0.13
PRKCSH-216ENST00000592445 DNASE2O00115 360 aaPredicted RBP14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 RTL8CO15255 209 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 SSX5O60225 188 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 PTHLHP12272 177 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 DEFB131AP59861 70 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 ERVK-16P61578 105 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 FAM90A2PQ658T7 463 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 TCF24Q7RTU0 167 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 STHQ8IWL8 128 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 OR10C1Q96KK4 312 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 RNF126Q9BV68 326 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 PLEKHA2Q9HB19 425 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 NDUFA4L2Q9NRX3 87 aa14.25□□□□□ -0.13
PRKCSH-216ENST00000592445 PPYP01298 95 aa14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 EIF4EP06730 217 aaKnown RBP14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 FXYD4P59646 89 aa14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 AADACL3Q5VUY0 350 aa14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 ZNF773Q6PK81 442 aa14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 POM121L12Q8N7R1 296 aa14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 GIMAP1Q8WWP7 306 aa14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 DGCR14Q96DF8 476 aaKnown RBP14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 DUSP21Q9H596 190 aa14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 OR51B2Q9Y5P1 312 aa14.24□□□□□ -0.13
PRKCSH-216ENST00000592445 SMIM30A4D0T7 59 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 SCGNO76038 276 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 DFFBO76075 338 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 CD5P06127 495 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 P0DMU3 169 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 FAM231AP0DMU4 169 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 FAM231CP0DMU5 169 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 MIFP14174 115 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 RPL11P62913 178 aaKnown RBP14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 BEST4Q8NFU0 473 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 MS4A6AQ9H2W1 248 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 COMMD9Q9P000 198 aa14.23□□□□□ -0.13
PRKCSH-216ENST00000592445 MFAP4P55083 255 aa14.22□□□□□ -0.13
PRKCSH-216ENST00000592445 SLC25A46Q96AG3 418 aa14.22□□□□□ -0.13
PRKCSH-216ENST00000592445 ZNF414Q96IQ9 312 aa14.22□□□□□ -0.13
PRKCSH-216ENST00000592445 KRTAP4-5Q9BYR2 181 aa14.22□□□□□ -0.13
PRKCSH-216ENST00000592445 NSG2Q9Y328 171 aa14.22□□□□□ -0.13
PRKCSH-216ENST00000592445 MARCH11A6NNE9 402 aa14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 ST8SIA3O43173 380 aa14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 SNAPC5O75971 98 aa14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 TMEM41BQ5BJD5 291 aa14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 ZNF818PQ6ZRF7 136 aa14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 ST8SIA2Q92186 375 aa14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 MISP3Q96FF7 219 aa14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 TMEM56Q96MV1 263 aa14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 GINS3Q9BRX5 216 aa14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 NXF2Q9GZY0 626 aaKnown RBP14.21□□□□□ -0.13
PRKCSH-216ENST00000592445 ELOA3CA0A087WX78 387 aaPredicted RBP14.2□□□□□ -0.14
PRKCSH-216ENST00000592445 DEFB131BA0A096LNP1 70 aa14.2□□□□□ -0.14
PRKCSH-216ENST00000592445 PRSS48Q7RTY5 328 aa14.2□□□□□ -0.14
PRKCSH-216ENST00000592445 TMEM17Q86X19 198 aa14.2□□□□□ -0.14
PRKCSH-216ENST00000592445 OR1P1Q8NH06 330 aa14.2□□□□□ -0.14
PRKCSH-216ENST00000592445 RABAC1Q9UI14 185 aa14.2□□□□□ -0.14
PRKCSH-216ENST00000592445 IGHV3-66A0A0C4DH42 116 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 TRDV1A0A1B0GX56 115 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 KRASP01116 189 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 AMBPP02760 352 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 GIG44P09565 113 aaPredicted RBP14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 C22orf42Q6IC83 251 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 MORN3Q6PF18 240 aaPredicted RBP14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 ZNF767PQ75MW2 155 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 FAM24BQ8N5W8 94 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 DUSP18Q8NEJ0 188 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 TXN2Q99757 166 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 NDUFAF3Q9BU61 184 aa14.19□□□□□ -0.14
PRKCSH-216ENST00000592445 TRAV2A0A0B4J234 112 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 ZNF705EA8MWA4 302 aaPredicted RBP14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 GNG7O60262 68 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 IGHV3-48P01763 117 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 APOHP02749 345 aaPredicted RBP14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 FCER2P06734 321 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 SPP1P10451 314 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 ZNF367Q7RTV3 350 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 HOGA1Q86XE5 327 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 LILRB2Q8N423 598 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 TSPAN14Q8NG11 270 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 VSIRQ9H7M9 311 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 NDUFB11Q9NX14 153 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 PRNDQ9UKY0 176 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 X6R8D5 127 aa14.18□□□□□ -0.14
PRKCSH-216ENST00000592445 NOTOA8MTQ0 251 aa14.17□□□□□ -0.14
PRKCSH-216ENST00000592445 I3L2K1 104 aa14.17□□□□□ -0.14
PRKCSH-216ENST00000592445 EBAG9O00559 213 aa14.17□□□□□ -0.14
PRKCSH-216ENST00000592445 F2RP25116 425 aa14.17□□□□□ -0.14
PRKCSH-216ENST00000592445 G6PCP35575 357 aa14.17□□□□□ -0.14
PRKCSH-216ENST00000592445 HERV-K104P61576 105 aa14.17□□□□□ -0.14
PRKCSH-216ENST00000592445 LGALS9BQ3B8N2 356 aa14.17□□□□□ -0.14
PRKCSH-216ENST00000592445 TOMM20LQ6UXN7 152 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms