RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 HINT2Q9BX68 163 aa18.86■□□□□ 0.61
CAPNS1-211ENST00000590874 NSG2Q9Y328 171 aa18.86■□□□□ 0.61
CAPNS1-211ENST00000590874 C15orf62A8K5M9 175 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 GNRHRP30968 328 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 ERVK-16P61578 105 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 Q56UQ5 140 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 OR5AP2Q8NGF4 316 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 BCL7BQ9BQE9 202 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 AUNIPQ9H7T9 357 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 SMPXQ9UHP9 88 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 SSR3Q9UNL2 185 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 ETV7Q9Y603 341 aa18.85■□□□□ 0.61
CAPNS1-211ENST00000590874 NOL3O60936 208 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-211ENST00000590874 NANOS2P60321 138 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-211ENST00000590874 CLVS1Q8IUQ0 354 aaPredicted RBP18.84■□□□□ 0.61
CAPNS1-211ENST00000590874 DGCR14Q96DF8 476 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-211ENST00000590874 CSTL1Q9H114 145 aa18.84■□□□□ 0.61
CAPNS1-211ENST00000590874 RNF167Q9H6Y7 350 aa18.84■□□□□ 0.61
CAPNS1-211ENST00000590874 MEIS3P1A6NDR6 274 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 CHEK1O14757 476 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 RLN1P04808 185 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 CTSGP08311 255 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 TFPI2P48307 235 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 SCAND1P57086 179 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 YIPF6Q96EC8 236 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 RARRES2Q99969 163 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 RHPN1-AS1Q9BWJ2 59 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 C6orf62Q9GZU0 229 aaPredicted RBP18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 OR51B2Q9Y5P1 312 aa18.83■□□□□ 0.6
CAPNS1-211ENST00000590874 IGHV3-49A0A0A0MS15 119 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 A0A0A6YYH2 397 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 IGHV7-4-1A0A0J9YVY3 117 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 CCDC160A6NGH7 325 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 A6NJ64 397 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 MPTX1A8MV57 137 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 TMBIM6P55061 237 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 HERV-K104P61576 105 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 IDNKQ5T6J7 187 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 RAB2BQ8WUD1 216 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 GATAD1Q8WUU5 269 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 FCAMRQ8WWV6 532 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 FBXL17Q9UF56 701 aa18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 RSL24D1Q9UHA3 163 aaKnown RBP18.82■□□□□ 0.6
CAPNS1-211ENST00000590874 PGLYRP1O75594 196 aaPredicted RBP18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 KRASP01116 189 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 F2RP25116 425 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 G6PCP35575 357 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 PRR20EP86478 221 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 PRR20CP86479 221 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 PRR20DP86480 221 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 PRR20BP86481 221 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 PRR20AP86496 221 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 GPR107Q5VW38 600 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 C11orf45Q8TAV5 145 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 FUNDC2Q9BWH2 189 aa18.81■□□□□ 0.6
CAPNS1-211ENST00000590874 IGKV3-7A0A075B6H7 116 aa18.8■□□□□ 0.6
CAPNS1-211ENST00000590874 DBX1A6NMT0 343 aa18.8■□□□□ 0.6
CAPNS1-211ENST00000590874 LPAR6P43657 344 aa18.8■□□□□ 0.6
CAPNS1-211ENST00000590874 TMEM116Q8NCL8 245 aa18.8■□□□□ 0.6
CAPNS1-211ENST00000590874 C11orf68Q9H3H3 251 aaKnown RBP18.8■□□□□ 0.6
CAPNS1-211ENST00000590874 EHFQ9NZC4 300 aa18.8■□□□□ 0.6
CAPNS1-211ENST00000590874 GABARAPO95166 117 aa18.79■□□□□ 0.6
CAPNS1-211ENST00000590874 CBX5P45973 191 aa18.79■□□□□ 0.6
CAPNS1-211ENST00000590874 RBMS2Q15434 407 aaKnown RBP18.79■□□□□ 0.6
CAPNS1-211ENST00000590874 OR11H2Q8NH07 326 aa18.79■□□□□ 0.6
CAPNS1-211ENST00000590874 BORCS5Q969J3 196 aa18.79■□□□□ 0.6
CAPNS1-211ENST00000590874 OR10C1Q96KK4 312 aa18.79■□□□□ 0.6
CAPNS1-211ENST00000590874 MFFQ9GZY8 342 aa18.79■□□□□ 0.6
CAPNS1-211ENST00000590874 DIABLOQ9NR28 239 aa18.79■□□□□ 0.6
CAPNS1-211ENST00000590874 HECTD4Q9Y4D8 3996 aa18.79■□□□□ 0.6
CAPNS1-211ENST00000590874 SNAPC5O75971 98 aa18.78■□□□□ 0.6
CAPNS1-211ENST00000590874 RELQ04864 619 aaPredicted RBP18.78■□□□□ 0.6
CAPNS1-211ENST00000590874 FAM90A2PQ658T7 463 aa18.78■□□□□ 0.6
CAPNS1-211ENST00000590874 GBGT1Q8N5D6 347 aa18.78■□□□□ 0.6
CAPNS1-211ENST00000590874 MOB3AQ96BX8 217 aa18.78■□□□□ 0.6
CAPNS1-211ENST00000590874 ZNF2Q9BSG1 426 aaPredicted RBP18.78■□□□□ 0.6
CAPNS1-211ENST00000590874 VPS13DQ5THJ4 4388 aa18.78■□□□□ 0.6
CAPNS1-211ENST00000590874 PCLOQ9Y6V0 5065 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 IGHV3OR16-13A0A075B7E8 117 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 IGHV3-74A0A0B4J1X5 117 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 DEFB4AO15263 64 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 NUPL2O15504 423 aaKnown RBP18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 YIF1AO95070 293 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 RFX2P48378 723 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 CMC4P56277 68 aaPredicted RBP18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 DHRS11Q6UWP2 260 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 CADM3Q8N126 398 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 OR1P1Q8NH06 330 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 SLC25A46Q96AG3 418 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 TMEM56Q96MV1 263 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 IFT46Q9NQC8 304 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 PRNDQ9UKY0 176 aa18.77■□□□□ 0.6
CAPNS1-211ENST00000590874 I3L2K1 104 aa18.76■□□□□ 0.59
CAPNS1-211ENST00000590874 MISP3Q96FF7 219 aa18.76■□□□□ 0.59
CAPNS1-211ENST00000590874 FXYD6Q9H0Q3 95 aa18.76■□□□□ 0.59
CAPNS1-211ENST00000590874 TMEM14BQ9NUH8 114 aa18.76■□□□□ 0.59
CAPNS1-211ENST00000590874 LOC100506127A0A0U1RQW1 187 aa18.75■□□□□ 0.59
CAPNS1-211ENST00000590874 IFNA4P05014 189 aa18.75■□□□□ 0.59
CAPNS1-211ENST00000590874 NXF2Q9GZY0 626 aaKnown RBP18.75■□□□□ 0.59
CAPNS1-211ENST00000590874 KIAA1109Q2LD37 5005 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms