RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-229ENST00000590704 FAM240BA0A1B0GVZ2 78 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 MPTX1A8MV57 137 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 NUDT19A8MXV4 375 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 DUS4LO95620 317 aaKnown RBP16.22■□□□□ 0.19
CIRBP-229ENST00000590704 ANXA3P12429 323 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 OR11H1Q8NG94 326 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 OR52E5Q8NH55 327 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 IGHV4OR15-8A0A075B7B6 117 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 A0A087WW49 117 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 DUXBA0A1W2PPF3 345 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 HLA-AP01891 365 aaKnown RBP16.22■□□□□ 0.19
CIRBP-229ENST00000590704 H2AFB2P0C5Z0 115 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 SRPXP78539 464 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 MZT2BQ6NZ67 158 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 HSD17B13Q7Z5P4 300 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-229ENST00000590704 USMG5Q96IX5 58 aa16.22■□□□□ 0.19
CIRBP-229ENST00000590704 F11RQ9Y624 299 aaKnown RBP16.22■□□□□ 0.19
CIRBP-229ENST00000590704 DNAH3Q8TD57 4116 aa16.21■□□□□ 0.19
CIRBP-229ENST00000590704 ADAP1O75689 374 aa16.21■□□□□ 0.19
CIRBP-229ENST00000590704 SPNP16150 400 aa16.21■□□□□ 0.19
CIRBP-229ENST00000590704 BSXQ3C1V8 233 aa16.21■□□□□ 0.19
CIRBP-229ENST00000590704 NECAP1Q8NC96 275 aa16.21■□□□□ 0.19
CIRBP-229ENST00000590704 MITD1Q8WV92 249 aa16.21■□□□□ 0.19
CIRBP-229ENST00000590704 SEC22CQ9BRL7 303 aa16.21■□□□□ 0.19
CIRBP-229ENST00000590704 NOTCH1P46531 2555 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 FAM223BA6NKX1 122 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 RAB25P57735 213 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 C15orf32Q32M92 178 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 GGNBP1Q5YKI7 109 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 FAM223AQ8IWN6 122 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 ZNF114Q8NC26 417 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 OR1N2Q8NGR9 330 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 TMEM170AQ8WVE7 144 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 FBXL7Q9UJT9 491 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 S4R3C0 116 aa16.2■□□□□ 0.18
CIRBP-229ENST00000590704 A0A0G2JLM5 398 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 A0A1B0GU03 582 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 MFSD2BA6NFX1 497 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 F8W735 103 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-229ENST00000590704 HOXB5P09067 269 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 SULT1A3P0DMM9 295 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 SULT1A4P0DMN0 295 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 SPCS3P61009 180 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 SMCO1Q147U7 214 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 ZNF414Q96IQ9 312 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 CCDC140Q96MF4 163 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 HSPB7Q9UBY9 170 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 TMED3Q9Y3Q3 217 aa16.19■□□□□ 0.18
CIRBP-229ENST00000590704 K7EIM0 57 aa16.18■□□□□ 0.18
CIRBP-229ENST00000590704 IFNA17P01571 189 aa16.18■□□□□ 0.18
CIRBP-229ENST00000590704 HSPB1P04792 205 aaKnown RBP16.18■□□□□ 0.18
CIRBP-229ENST00000590704 RNASE2P10153 161 aaKnown RBP16.18■□□□□ 0.18
CIRBP-229ENST00000590704 SLC25A6P12236 298 aa16.18■□□□□ 0.18
CIRBP-229ENST00000590704 C4orf46Q504U0 113 aa16.18■□□□□ 0.18
CIRBP-229ENST00000590704 RNASE11Q8TAA1 199 aaKnown RBP16.18■□□□□ 0.18
CIRBP-229ENST00000590704 MARVELD1Q9BSK0 173 aa16.18■□□□□ 0.18
CIRBP-229ENST00000590704 NXPH3O95157 252 aa16.17■□□□□ 0.18
CIRBP-229ENST00000590704 ATP5G2Q06055 141 aa16.17■□□□□ 0.18
CIRBP-229ENST00000590704 ZNF616Q08AN1 781 aa16.17■□□□□ 0.18
CIRBP-229ENST00000590704 OR1P1Q8NH06 330 aa16.17■□□□□ 0.18
CIRBP-229ENST00000590704 PLEKHA3Q9HB20 300 aa16.17■□□□□ 0.18
CIRBP-229ENST00000590704 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.16■□□□□ 0.18
CIRBP-229ENST00000590704 C13orf42A0A1B0GVH6 325 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 ANKRD34BA5PLL1 514 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 IGHV3-23P01764 117 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 PF4P02776 101 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 IL5P05113 134 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 HIST1H1BP16401 226 aaKnown RBP16.16■□□□□ 0.18
CIRBP-229ENST00000590704 SLURP1P55000 103 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 TNFRSF9Q07011 255 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 ZNF431Q8TF32 576 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-229ENST00000590704 DLX4Q92988 240 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-229ENST00000590704 I3L2K1 104 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 BMPR1BO00238 502 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 EXOSC2Q13868 293 aaKnown RBP16.16■□□□□ 0.18
CIRBP-229ENST00000590704 SLC25A24Q6NUK1 477 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 DCUN1D4Q92564 292 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 OR10C1Q96KK4 312 aa16.16■□□□□ 0.18
CIRBP-229ENST00000590704 PEF1Q9UBV8 284 aaKnown RBP16.16■□□□□ 0.18
CIRBP-229ENST00000590704 LINC01619G3V211 115 aa16.15■□□□□ 0.18
CIRBP-229ENST00000590704 DEFA4P12838 97 aa16.15■□□□□ 0.18
CIRBP-229ENST00000590704 OXLD1Q5BKU9 147 aa16.15■□□□□ 0.18
CIRBP-229ENST00000590704 SAMD5Q5TGI4 173 aa16.15■□□□□ 0.18
CIRBP-229ENST00000590704 COQ8AQ8NI60 647 aa16.15■□□□□ 0.18
CIRBP-229ENST00000590704 ZNF502Q8TBZ5 544 aa16.15■□□□□ 0.18
CIRBP-229ENST00000590704 RBKSQ9H477 322 aa16.15■□□□□ 0.18
CIRBP-229ENST00000590704 IGHV3-21A0A0B4J1V1 117 aa16.14■□□□□ 0.17
CIRBP-229ENST00000590704 G3V4G9 280 aa16.14■□□□□ 0.17
CIRBP-229ENST00000590704 DHFRP00374 187 aa16.14■□□□□ 0.17
CIRBP-229ENST00000590704 IGLL1P15814 213 aa16.14■□□□□ 0.17
CIRBP-229ENST00000590704 ERHP84090 104 aaKnown RBP16.14■□□□□ 0.17
CIRBP-229ENST00000590704 MLANAQ16655 118 aa16.14■□□□□ 0.17
CIRBP-229ENST00000590704 OR4D5Q8NGN0 318 aa16.14■□□□□ 0.17
CIRBP-229ENST00000590704 ENKURQ8TC29 256 aa16.14■□□□□ 0.17
CIRBP-229ENST00000590704 SCARB1Q8WTV0 552 aa16.14■□□□□ 0.17
CIRBP-229ENST00000590704 ID3Q02535 119 aa16.13■□□□□ 0.17
CIRBP-229ENST00000590704 KLF5Q13887 457 aaPredicted RBP16.13■□□□□ 0.17
CIRBP-229ENST00000590704 VN1R17PQ8TDU5 208 aa16.13■□□□□ 0.17
CIRBP-229ENST00000590704 FNDC4Q9H6D8 234 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms