RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 DNLZQ5SXM8 178 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 FAM71F2Q6NXP2 309 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 LINC01551Q86U37 167 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 OR10D4PQ8NGN7 298 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 OR10X1Q8NGY0 326 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 OR4A5Q8NH83 315 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 SSMEM1Q8WWF3 244 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 CACNG8Q8WXS5 425 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 ZCCHC14Q8WYQ9 949 aaKnown RBP6.05□□□□□ -1.44
ZNF540-206ENST00000589117 TMEM186Q96B77 213 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 FLYWCH2Q96CP2 140 aaKnown RBP6.05□□□□□ -1.44
ZNF540-206ENST00000589117 Q9UFV3 132 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 PTPRBP23467 1997 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 CHD3Q12873 2000 aaKnown RBP6.05□□□□□ -1.44
ZNF540-206ENST00000589117 A0A1W2PN81 502 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 GGCTO75223 188 aaKnown RBP6.04□□□□□ -1.44
ZNF540-206ENST00000589117 TYMSP04818 313 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 USF1P22415 310 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-206ENST00000589117 CHRNA7P36544 502 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 NBL1P41271 181 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 CTAG1AP78358 180 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 BSPH1Q075Z2 132 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 SSX2Q16385 188 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 C2orf83Q53S99 150 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 GCSAMLQ5JQS6 135 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 ZNF833PQ6ZTB9 187 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 TMEM183AQ8IXX5 376 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 HIST3H2BBQ8N257 126 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 C8orf31Q8N9H6 132 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 OR5T1Q8NG75 326 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 OR4C13Q8NGP0 309 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 OR1L8Q8NGR8 309 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 NEUROG1Q92886 237 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 RNF2Q99496 336 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 TECRQ9NZ01 308 aaKnown RBP6.04□□□□□ -1.44
ZNF540-206ENST00000589117 DMRT1Q9Y5R6 373 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 DIDO1Q9BTC0 2240 aaKnown RBP6.04□□□□□ -1.44
ZNF540-206ENST00000589117 DOCK11Q5JSL3 2073 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 TMEM178BH3BS89 294 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 FABP4P15090 132 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 IL3RAP26951 378 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 GCHFRP30047 84 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 MC5RP33032 325 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 GPX4P36969 197 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-206ENST00000589117 ATP5G3P48201 142 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 GNB1P62873 340 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 RPL8P62917 257 aaKnown RBP6.04□□□□□ -1.44
ZNF540-206ENST00000589117 PQLC2Q6ZP29 291 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 PNKDQ8N490 385 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 OR4X1Q8NH49 305 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 CCL17Q92583 94 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 RND1Q92730 232 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 SFRP2Q96HF1 295 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 HARBI1Q96MB7 349 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 PCGF1Q9BSM1 259 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 GPR61Q9BZJ8 451 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 DYNLRB1Q9NP97 96 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 LY96Q9Y6Y9 160 aa6.04□□□□□ -1.44
ZNF540-206ENST00000589117 SVILO95425 2214 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 TRAV9-1A0A075B6T8 112 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 TEX50A0A1B0GTY4 177 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 XKRY2A2RUG3 117 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 DPRXA6NFQ7 191 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 K7EM74 188 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 IGKV1-16P04430 117 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 AREGP15514 252 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 FAM78BQ5VT40 261 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 PDPNQ86YL7 162 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 OR4P4Q8NGL7 312 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 H1FXQ92522 213 aaKnown RBP6.03□□□□□ -1.44
ZNF540-206ENST00000589117 PACRGQ96M98 296 aaPredicted RBP6.03□□□□□ -1.44
ZNF540-206ENST00000589117 JKAMPQ9P055 326 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 INS-IGF2F8WCM5 200 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 SOD3P08294 240 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 SAA1P0DJI8 122 aaPredicted RBP6.03□□□□□ -1.44
ZNF540-206ENST00000589117 DEFA4P12838 97 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 NPPCP23582 126 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 CASP6P55212 293 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 HLA-DRB5Q30154 266 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 TMEM200BQ69YZ2 307 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 DUX4L9Q6RFH8 374 aaPredicted RBP6.03□□□□□ -1.44
ZNF540-206ENST00000589117 TCF23Q7RTU1 214 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 LINC00311Q8N616 119 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 OR10G8Q8NGN5 311 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 TMEM170AQ8WVE7 144 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 CFHR4Q92496 578 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 NABP2Q9BQ15 211 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 SEPSECSQ9HD40 501 aaKnown RBP6.03□□□□□ -1.44
ZNF540-206ENST00000589117 TMEM106BQ9NUM4 274 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 FUT9Q9Y231 359 aa6.03□□□□□ -1.44
ZNF540-206ENST00000589117 A0A0U1RQK1 487 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 ZNF320A2RRD8 509 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 C9JCJ5 164 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 IGFBP2P18065 325 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 CCKARP32238 428 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 LGALS7P47929 136 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 TDGF1P3P51864 188 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 VMA21Q3ZAQ7 101 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 PDZD11Q5EBL8 140 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 PYY3Q5JQD4 70 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms