RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 STPG3Q8N7X2 389 aa11.45□□□□□ -0.58
CACNA1A-209ENST00000587525 TMEM45BQ96B21 275 aa11.45□□□□□ -0.58
CACNA1A-209ENST00000587525 EAF1Q96JC9 268 aaPredicted RBP11.45□□□□□ -0.58
CACNA1A-209ENST00000587525 PMCHL2Q9BQD1 86 aa11.45□□□□□ -0.58
CACNA1A-209ENST00000587525 WASHC3Q9Y3C0 194 aa11.45□□□□□ -0.58
CACNA1A-209ENST00000587525 SERTM2A0A1B0GWG4 89 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 DKK1O94907 266 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 CD59P13987 128 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 LEMD1Q68G75 181 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 Q6P435 159 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 SAXO1Q8IYX7 474 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 SORL1Q92673 2214 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 CDKN1AP38936 164 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 MFAP2P55001 183 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 FOXA3P55318 350 aaPredicted RBP11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 LSM10Q969L4 123 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 C2orf88Q9BSF0 95 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 SAP30LQ9HAJ7 183 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 M0R2Z0 102 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 MGST3O14880 152 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 NUPR1O60356 82 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 GPR6P46095 362 aaPredicted RBP11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 ATP6V1FQ16864 119 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 UNQ5815/PRO19632Q6UWF5 114 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 ZCCHC14Q8WYQ9 949 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 SEPSECSQ9HD40 501 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 RNF7Q9UBF6 113 aa11.44□□□□□ -0.58
CACNA1A-209ENST00000587525 IGHV2OR16-5A0A0B4J2B6 119 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 IGLV3-1P01715 115 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 LYZP61626 148 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 ACSF3Q4G176 576 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 PRO3102Q9H379 93 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 NPVFQ9HCQ7 196 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 TRBV24-1A0A075B6N3 115 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 RPEL1Q2QD12 228 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 CD177Q8N6Q3 437 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 OR9G1Q8NH87 305 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 SPSB4Q96A44 273 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 SFRP2Q96HF1 295 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 MCRIP2Q9BUT9 160 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 POLR3KQ9Y2Y1 108 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 TBL2Q9Y4P3 447 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 TRAV5A0A0B4J249 113 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 OR5R1Q8NH85 324 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 OR2T6Q8NHC8 308 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 TMEM170AQ8WVE7 144 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 IGFBPL1Q8WX77 278 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 NPIPB3Q92617 1050 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 RNF115Q9Y4L5 304 aa11.43□□□□□ -0.58
CACNA1A-209ENST00000587525 ZFYVE26Q68DK2 2539 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 USF1P22415 310 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 UQCRFS1P47985 274 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 TMEM131Q92545 1883 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 ASPMQ8IZT6 3477 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 LOC400499M0QZD8 3231 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 A0A1W2PNU3 283 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 NDUFB3O43676 98 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 LINC00869P0C866 280 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 FOXL2NBQ6ZUU3 175 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 OCC1Q8TAD7 63 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 LPAR2Q9HBW0 351 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 BET1LQ9NYM9 111 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 ONECUT1Q9UBC0 465 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 DLEU1O43261 78 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 ADH4P08319 380 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 RELBQ01201 579 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 LBHQ53QV2 105 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 OR1L4Q8NGR5 311 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 LINC00479Q96M42 142 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 HILPDAQ9Y5L2 63 aa11.42□□□□□ -0.58
CACNA1A-209ENST00000587525 ARHGAP32A7KAX9 2087 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 IL6RP08887 468 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 TAS2R45P59539 299 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 SPRNQ5BIV9 151 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 OR4A47Q6IF82 309 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 TMEM106BQ9NUM4 274 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 SLC25A10Q9UBX3 287 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 ABCA2Q9BZC7 2435 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 IGKV3D-15A0A087WSY6 115 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 NCBP2LA6PVI3 153 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 KIR2DL2P43627 348 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 Q6ZR03 302 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 MMD2Q8IY49 270 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 P2RX4Q99571 388 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 F2Z2F3 143 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 CXorf1O96002 111 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 RND2P52198 227 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 ASCL4Q6XD76 172 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 ZNF114Q8NC26 417 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 NABP2Q9BQ15 211 aa11.41□□□□□ -0.58
CACNA1A-209ENST00000587525 PRR33A8MZF0 331 aa11.4□□□□□ -0.58
CACNA1A-209ENST00000587525 PYYP10082 97 aa11.4□□□□□ -0.58
CACNA1A-209ENST00000587525 CENPWQ5EE01 88 aa11.4□□□□□ -0.58
CACNA1A-209ENST00000587525 COLCA1Q6ZS62 124 aa11.4□□□□□ -0.58
CACNA1A-209ENST00000587525 LINC00596Q86U02 117 aa11.4□□□□□ -0.58
CACNA1A-209ENST00000587525 IGHV3OR16-13A0A075B7E8 117 aa11.4□□□□□ -0.58
CACNA1A-209ENST00000587525 SAA2-SAA4A0A096LPE2 208 aa11.4□□□□□ -0.58
CACNA1A-209ENST00000587525 IGHV3-74A0A0B4J1X5 117 aa11.4□□□□□ -0.58
CACNA1A-209ENST00000587525 hADV38S2A0JD32 116 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms