RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 RARRES2Q99969 163 aa10.62□□□□□ -0.71
SDF2-202ENST00000585428 RHPN1-AS1Q9BWJ2 59 aa10.62□□□□□ -0.71
SDF2-202ENST00000585428 ZFAND3Q9H8U3 227 aa10.62□□□□□ -0.71
SDF2-202ENST00000585428 SSR3Q9UNL2 185 aa10.62□□□□□ -0.71
SDF2-202ENST00000585428 IGHV7-4-1A0A0J9YVY3 117 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 MPTX1A8MV57 137 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 FCER2P06734 321 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 CLEC2LP0C7M8 214 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 F2RP25116 425 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 HSPA13P48723 471 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 GABARAPL2P60520 117 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 AADACL3Q5VUY0 350 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 FCAMRQ8WWV6 532 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 LSM10Q969L4 123 aaKnown RBP10.61□□□□□ -0.71
SDF2-202ENST00000585428 C6orf62Q9GZU0 229 aaPredicted RBP10.61□□□□□ -0.71
SDF2-202ENST00000585428 NSG2Q9Y328 171 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 OR51B2Q9Y5P1 312 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 PCLOQ9Y6V0 5065 aa10.61□□□□□ -0.71
SDF2-202ENST00000585428 KRASP01116 189 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 LPAR6P43657 344 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 CBX5P45973 191 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 NANOS2P60321 138 aaKnown RBP10.6□□□□□ -0.71
SDF2-202ENST00000585428 IZUMO2Q6UXV1 221 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 TMEM116Q8NCL8 245 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 C11orf45Q8TAV5 145 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 BORCS5Q969J3 196 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 DGCR14Q96DF8 476 aaKnown RBP10.6□□□□□ -0.71
SDF2-202ENST00000585428 VCX3BQ9H321 246 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 DIABLOQ9NR28 239 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 RAB26Q9ULW5 256 aa10.6□□□□□ -0.71
SDF2-202ENST00000585428 I3L2K1 104 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 PSMB9P28065 219 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 G6PCP35575 357 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 RFX2P48378 723 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 ERVK-16P61578 105 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 RELQ04864 619 aaPredicted RBP10.59□□□□□ -0.71
SDF2-202ENST00000585428 MXD1Q05195 221 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 Q56UQ5 140 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 IDNKQ5T6J7 187 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 TMEM17Q86X19 198 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 UBAC2Q8NBM4 344 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 OR1P1Q8NH06 330 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 FCGR1BQ92637 280 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 MOB3AQ96BX8 217 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 TXN2Q99757 166 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 HINT2Q9BX68 163 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 MFFQ9GZY8 342 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
SDF2-202ENST00000585428 RNF167Q9H6Y7 350 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 TMEM14BQ9NUH8 114 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 FKBP11Q9NYL4 201 aa10.59□□□□□ -0.71
SDF2-202ENST00000585428 TRAV14DV4A0A0A6YYC5 116 aa10.58□□□□□ -0.72
SDF2-202ENST00000585428 DBX1A6NMT0 343 aa10.58□□□□□ -0.72
SDF2-202ENST00000585428 NUPL2O15504 423 aaKnown RBP10.58□□□□□ -0.72
SDF2-202ENST00000585428 SNAPC5O75971 98 aa10.58□□□□□ -0.72
SDF2-202ENST00000585428 IFNA4P05014 189 aa10.58□□□□□ -0.72
SDF2-202ENST00000585428 TCTAP57738 103 aa10.58□□□□□ -0.72
SDF2-202ENST00000585428 RBMS2Q15434 407 aaKnown RBP10.58□□□□□ -0.72
SDF2-202ENST00000585428 TMEM56Q96MV1 263 aa10.58□□□□□ -0.72
SDF2-202ENST00000585428 NXF2Q9GZY0 626 aaKnown RBP10.58□□□□□ -0.72
SDF2-202ENST00000585428 PRNDQ9UKY0 176 aa10.58□□□□□ -0.72
SDF2-202ENST00000585428 MEIS3P1A6NDR6 274 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 XRCC3O43542 346 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 RLN1P04808 185 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 NAT1P18440 290 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 TFPI2P48307 235 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 MFAP4P55083 255 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 HERV-K104P61576 105 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 LILRB2Q8N423 598 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 SLC25A46Q96AG3 418 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 ZNF2Q9BSG1 426 aaPredicted RBP10.57□□□□□ -0.72
SDF2-202ENST00000585428 EHFQ9NZC4 300 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 ANAPC10Q9UM13 185 aa10.57□□□□□ -0.72
SDF2-202ENST00000585428 IGHV3-49A0A0A0MS15 119 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 TMEM127O75204 238 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 YIF1AO95070 293 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 CD5P06127 495 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 LYSMD2Q8IV50 215 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 GBGT1Q8N5D6 347 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 YTHDF1Q9BYJ9 559 aaKnown RBP10.56□□□□□ -0.72
SDF2-202ENST00000585428 VSIRQ9H7M9 311 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 FAM212BQ9NTI7 297 aaPredicted RBP10.56□□□□□ -0.72
SDF2-202ENST00000585428 FBXL17Q9UF56 701 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 APLNQ9ULZ1 77 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 DNAH10Q8IVF4 4471 aa10.56□□□□□ -0.72
SDF2-202ENST00000585428 IGKV3-7A0A075B6H7 116 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 C15orf61A6NNL5 157 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 DEFB4AO15263 64 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 PMP2P02689 132 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 PAFAH1B2P68402 229 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 CMTM1Q8IZ96 169 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 ZNF114Q8NC26 417 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 S100A16Q96FQ6 103 aaKnown RBP10.55□□□□□ -0.72
SDF2-202ENST00000585428 SEC22AQ96IW7 307 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 CMTM3Q96MX0 182 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 TSC22D3Q99576 134 aa10.55□□□□□ -0.72
SDF2-202ENST00000585428 IGHV3OR16-13A0A075B7E8 117 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms