RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TECRQ9NZ01 308 aaKnown RBP13.05□□□□□ -0.32
SMG6-212ENST00000573153 LYSTQ99698 3801 aa13.04□□□□□ -0.32
SMG6-212ENST00000573153 GSTZ1O43708 216 aaPredicted RBP13.04□□□□□ -0.32
SMG6-212ENST00000573153 CLEC3BP05452 202 aa13.04□□□□□ -0.32
SMG6-212ENST00000573153 FOLR2P14207 255 aa13.04□□□□□ -0.32
SMG6-212ENST00000573153 PGAM2P15259 253 aa13.04□□□□□ -0.32
SMG6-212ENST00000573153 FAM106AQ4KMX7 169 aa13.04□□□□□ -0.32
SMG6-212ENST00000573153 UNQ9165/PRO28630Q6UXU0 137 aa13.04□□□□□ -0.32
SMG6-212ENST00000573153 H2BFWTQ7Z2G1 175 aa13.04□□□□□ -0.32
SMG6-212ENST00000573153 ZNF114Q8NC26 417 aa13.04□□□□□ -0.32
SMG6-212ENST00000573153 NOL3O60936 208 aaKnown RBP13.03□□□□□ -0.32
SMG6-212ENST00000573153 CTSDP07339 412 aaPredicted RBP13.03□□□□□ -0.32
SMG6-212ENST00000573153 PI3P19957 117 aa13.03□□□□□ -0.32
SMG6-212ENST00000573153 PRCDQ00LT1 54 aa13.03□□□□□ -0.32
SMG6-212ENST00000573153 SURF2Q15527 256 aaPredicted RBP13.03□□□□□ -0.32
SMG6-212ENST00000573153 SGPP2Q8IWX5 399 aa13.03□□□□□ -0.32
SMG6-212ENST00000573153 CCDC71LQ8N9Z2 235 aa13.03□□□□□ -0.32
SMG6-212ENST00000573153 OR13C8Q8NGS7 320 aa13.03□□□□□ -0.32
SMG6-212ENST00000573153 OR1P1Q8NH06 330 aa13.03□□□□□ -0.32
SMG6-212ENST00000573153 TP53RKQ96S44 253 aa13.03□□□□□ -0.32
SMG6-212ENST00000573153 ZNF436Q9C0F3 470 aaPredicted RBP13.03□□□□□ -0.32
SMG6-212ENST00000573153 EDA2RQ9HAV5 297 aa13.03□□□□□ -0.32
SMG6-212ENST00000573153 C3orf85A0A1B0GTC6 90 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 INS-IGF2F8WCM5 200 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 ATG12O94817 140 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 IGKV1-5P01602 117 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 CD7P09564 240 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 UCP1P25874 307 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 PPP5CP53041 499 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 ELLP55199 621 aaPredicted RBP13.02□□□□□ -0.33
SMG6-212ENST00000573153 HSPE1P61604 102 aaKnown RBP13.02□□□□□ -0.33
SMG6-212ENST00000573153 IL18Q14116 193 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 OR2C3Q8N628 320 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 OR4A16Q8NH70 328 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 HINT2Q9BX68 163 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 WFDC10AQ9H1F0 79 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 COPZ2Q9P299 210 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 MLXQ9UH92 298 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 RSL24D1Q9UHA3 163 aaKnown RBP13.02□□□□□ -0.33
SMG6-212ENST00000573153 CEPT1Q9Y6K0 416 aa13.02□□□□□ -0.33
SMG6-212ENST00000573153 K7EIM0 57 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 TGOLN2O43493 480 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 AKAIN1P0CW23 69 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 C8orf88P0DMB2 117 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 CBLN1P23435 193 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 FCGR2BP31994 310 aaPredicted RBP13.01□□□□□ -0.33
SMG6-212ENST00000573153 GPR183P32249 361 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 HAGHQ16775 308 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 SCGB2B2Q4G0G5 96 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 SLC25A24Q6NUK1 477 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 GTSCR1Q86UQ5 136 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 MARCH1Q8TCQ1 289 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 MARC2Q969Z3 335 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 BSCL2Q96G97 398 aaPredicted RBP13.01□□□□□ -0.33
SMG6-212ENST00000573153 C6orf62Q9GZU0 229 aaPredicted RBP13.01□□□□□ -0.33
SMG6-212ENST00000573153 SLC2A8Q9NY64 477 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 SELENOKQ9Y6D0 94 aa13.01□□□□□ -0.33
SMG6-212ENST00000573153 ANKRD20A5PA0PJZ0 165 aa13□□□□□ -0.33
SMG6-212ENST00000573153 DISC1C4P0D8 188 aa13□□□□□ -0.33
SMG6-212ENST00000573153 PLET1Q6UQ28 207 aa13□□□□□ -0.33
SMG6-212ENST00000573153 TMEM61Q8N0U2 210 aa13□□□□□ -0.33
SMG6-212ENST00000573153 OR4C16Q8NGL9 310 aa13□□□□□ -0.33
SMG6-212ENST00000573153 DYNLRB2Q8TF09 96 aa13□□□□□ -0.33
SMG6-212ENST00000573153 SCARB1Q8WTV0 552 aa13□□□□□ -0.33
SMG6-212ENST00000573153 WDR89Q96FK6 387 aaPredicted RBP13□□□□□ -0.33
SMG6-212ENST00000573153 RTBDNQ9BSG5 229 aaPredicted RBP13□□□□□ -0.33
SMG6-212ENST00000573153 PALMDQ9NP74 551 aa13□□□□□ -0.33
SMG6-212ENST00000573153 C21orf62Q9NYP8 219 aa13□□□□□ -0.33
SMG6-212ENST00000573153 PLECQ15149 4684 aaKnown RBP13□□□□□ -0.33
SMG6-212ENST00000573153 DNAH1Q9P2D7 4330 aa13□□□□□ -0.33
SMG6-212ENST00000573153 A0A0B4J293 547 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 TNFSF8P32971 234 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 ADMP35318 185 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 AARDQ4LEZ3 155 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 FAAP20Q6NZ36 180 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 MCFD2Q8NI22 146 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 TMEM190Q8WZ59 177 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 CITED4Q96RK1 184 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 PRRT1Q99946 306 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 TMEM222Q9H0R3 208 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 C5orf66Q9H5L9 145 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 GPR132Q9UNW8 380 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 UFC1Q9Y3C8 167 aa12.99□□□□□ -0.33
SMG6-212ENST00000573153 ZNF320A2RRD8 509 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 C3orf84H3BNL1 204 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 I3L2K1 104 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 CDS2O95674 445 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 TM4SF20Q53R12 229 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 CASC10Q5T4H9 136 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 PVRIGQ6DKI7 326 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 MUC7Q8TAX7 377 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 TXN2Q99757 166 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 NEURL2Q9BR09 285 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 RBM38Q9H0Z9 239 aaKnown RBP12.98□□□□□ -0.33
SMG6-212ENST00000573153 PLEKHA3Q9HB20 300 aa12.98□□□□□ -0.33
SMG6-212ENST00000573153 GAR1Q9NY12 217 aaKnown RBP12.98□□□□□ -0.33
SMG6-212ENST00000573153 MRPL27Q9P0M9 148 aaKnown RBP12.98□□□□□ -0.33
SMG6-212ENST00000573153 C14orf166Q9Y224 244 aaKnown RBP12.98□□□□□ -0.33
SMG6-212ENST00000573153 RBMY1BA6NDE4 496 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms