RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 DDTP30046 118 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 YPEL3P61236 119 aaPredicted RBP18.54■□□□□ 0.56
VPS53-211ENST00000571805 ADIPOQQ15848 244 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 MLANAQ16655 118 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 OR5B3Q8NH48 314 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 MRPL20Q9BYC9 149 aaKnown RBP18.54■□□□□ 0.56
VPS53-211ENST00000571805 ARL2-SNX15V9GYD0 113 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 DPRXA6NFQ7 191 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 NKX6-3A6NJ46 265 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 C17orf100A8MU93 164 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 TSTD3H0UI37 97 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 TNFRSF1AP19438 455 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 MEF2CQ06413 473 aaPredicted RBP18.54■□□□□ 0.56
VPS53-211ENST00000571805 GBGT1Q8N5D6 347 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 OR1L8Q8NGR8 309 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 TMEM18Q96B42 140 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 ZNF503Q96F45 646 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 GAL3ST2Q9H3Q3 398 aa18.54■□□□□ 0.56
VPS53-211ENST00000571805 A0A0G2JNJ9 132 aa18.53■□□□□ 0.56
VPS53-211ENST00000571805 GATA2P23769 480 aaPredicted RBP18.53■□□□□ 0.56
VPS53-211ENST00000571805 PSG5Q15238 335 aa18.53■□□□□ 0.56
VPS53-211ENST00000571805 OR10W1Q8NGF6 305 aa18.53■□□□□ 0.56
VPS53-211ENST00000571805 OSR1Q8TAX0 266 aaPredicted RBP18.53■□□□□ 0.56
VPS53-211ENST00000571805 EAF1Q96JC9 268 aaPredicted RBP18.53■□□□□ 0.56
VPS53-211ENST00000571805 SLC35E1Q96K37 410 aa18.53■□□□□ 0.56
VPS53-211ENST00000571805 Q9UFV3 132 aa18.53■□□□□ 0.56
VPS53-211ENST00000571805 OR10J1P30954 320 aa18.53■□□□□ 0.56
VPS53-211ENST00000571805 UNQ6494/PRO21346Q6UXR6 183 aa18.53■□□□□ 0.56
VPS53-211ENST00000571805 IL36BQ9NZH7 164 aa18.53■□□□□ 0.56
VPS53-211ENST00000571805 C16orf97H3BN30 126 aa18.52■□□□□ 0.56
VPS53-211ENST00000571805 CCL3L1P16619 93 aa18.52■□□□□ 0.56
VPS53-211ENST00000571805 DOLPP1Q86YN1 238 aa18.52■□□□□ 0.56
VPS53-211ENST00000571805 TMEM167BQ9NRX6 74 aa18.52■□□□□ 0.56
VPS53-211ENST00000571805 H0YJW9 148 aa18.52■□□□□ 0.55
VPS53-211ENST00000571805 KLK10O43240 276 aa18.52■□□□□ 0.55
VPS53-211ENST00000571805 WFDC8Q8IUA0 241 aa18.52■□□□□ 0.55
VPS53-211ENST00000571805 PNKDQ8N490 385 aa18.52■□□□□ 0.55
VPS53-211ENST00000571805 NDUFA4L2Q9NRX3 87 aa18.52■□□□□ 0.55
VPS53-211ENST00000571805 TECRQ9NZ01 308 aaKnown RBP18.52■□□□□ 0.55
VPS53-211ENST00000571805 SLC17A3O00476 420 aa18.51■□□□□ 0.55
VPS53-211ENST00000571805 TMEM200BQ69YZ2 307 aa18.51■□□□□ 0.55
VPS53-211ENST00000571805 OR5AN1Q8NGI8 311 aa18.51■□□□□ 0.55
VPS53-211ENST00000571805 OR9G1Q8NH87 305 aa18.51■□□□□ 0.55
VPS53-211ENST00000571805 CEP250Q9BV73 2442 aa18.51■□□□□ 0.55
VPS53-211ENST00000571805 MKRN2OSH3BPM6 223 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 ADMP35318 185 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 CD69Q07108 199 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 TRAV9-1A0A075B6T8 112 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 THBDP07204 575 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 OR5G3P0C626 314 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 TMEM177Q53S58 311 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 REC114Q7Z4M0 266 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 TMEM256Q8N2U0 113 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 ZNF664Q8N3J9 261 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 HARBI1Q96MB7 349 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 ZNF714Q96N38 554 aa18.5■□□□□ 0.55
VPS53-211ENST00000571805 A0A087X0M5 115 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 A0A1B0GUS0 222 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 A0A1B0GX30 115 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 APOA2P02652 100 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 ZNF90Q03938 601 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 C19orf24Q9BVV8 132 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 CRYBB3P26998 211 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 BSPH1Q075Z2 132 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 PQLC2Q6ZP29 291 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 BSNQ9UPA5 3926 aa18.49■□□□□ 0.55
VPS53-211ENST00000571805 E7EUB6 86 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 NUPR1O60356 82 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 CHRNB4P30926 498 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 WFIKKN1Q96NZ8 548 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 HELTA6NFD8 242 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 TMEM178BH3BS89 294 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 TDGF1P3P51864 188 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 RPL8P62917 257 aaKnown RBP18.48■□□□□ 0.55
VPS53-211ENST00000571805 OR5I1Q13606 314 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 MRPL41Q8IXM3 137 aaKnown RBP18.48■□□□□ 0.55
VPS53-211ENST00000571805 LINC00469Q8N7U9 141 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 COMMD5Q9GZQ3 224 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 V9GYV3 84 aa18.48■□□□□ 0.55
VPS53-211ENST00000571805 PPIAL4EA0A075B759 164 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 ZNF705GA8MUZ8 300 aaPredicted RBP18.47■□□□□ 0.55
VPS53-211ENST00000571805 PPIAL4DF5H284 164 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 INS-IGF2F8WCM5 200 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 TNFRSF13BO14836 293 aaPredicted RBP18.47■□□□□ 0.55
VPS53-211ENST00000571805 PPIAL4FP0DN26 164 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 REG1BP48304 166 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 LGALS4P56470 323 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 PPIAL4AQ9Y536 164 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 SELENOTP62341 195 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 CENPWQ5EE01 88 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 CACNG8Q8WXS5 425 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 FLYWCH2Q96CP2 140 aaKnown RBP18.47■□□□□ 0.55
VPS53-211ENST00000571805 SLC25A33Q9BSK2 321 aa18.47■□□□□ 0.55
VPS53-211ENST00000571805 PSMB11A5LHX3 300 aa18.46■□□□□ 0.55
VPS53-211ENST00000571805 GGTLC3B5MD39 225 aa18.46■□□□□ 0.55
VPS53-211ENST00000571805 PRRG2O14669 202 aa18.46■□□□□ 0.55
VPS53-211ENST00000571805 OR7C2O60412 319 aa18.46■□□□□ 0.55
VPS53-211ENST00000571805 DIAPH2-AS1Q14236 149 aa18.46■□□□□ 0.55
VPS53-211ENST00000571805 OR2T6Q8NHC8 308 aa18.46■□□□□ 0.55
VPS53-211ENST00000571805 SAP30LQ9HAJ7 183 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms