RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PLA2G10O15496 165 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 SNAPC5O75971 98 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 IGHV3-11P01762 117 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 PRH1P02810 166 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 TRAPPC2P0DI81 140 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 TRAPPC2BP0DI82 140 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 WT1-ASQ06250 92 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 ZNF616Q08AN1 781 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 TMEM187Q14656 261 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 ZNF343Q6P1L6 599 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 C19orf35Q6ZS72 473 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 H2BFWTQ7Z2G1 175 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 HSD17B13Q7Z5P4 300 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-204ENST00000563130 SGPP2Q8IWX5 399 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 NECAP1Q8NC96 275 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 OR10W1Q8NGF6 305 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 OR1L8Q8NGR8 309 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 OR1N2Q8NGR9 330 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 RBPMSQ93062 196 aaKnown RBP4.77□□□□□ -1.65
CNOT1-204ENST00000563130 OR5B12Q96R08 314 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 C7orf50Q9BRJ6 194 aaKnown RBP4.77□□□□□ -1.65
CNOT1-204ENST00000563130 FKBP11Q9NYL4 201 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 OR51B2Q9Y5P1 312 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 DMRT1Q9Y5R6 373 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 IGLV11-55A0A075B6I3 123 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 FAM223BA6NKX1 122 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 G3V4G9 280 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 ATG12O94817 140 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 NDUFB6O95139 128 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 DUS4LO95620 317 aaKnown RBP4.76□□□□□ -1.65
CNOT1-204ENST00000563130 CCR6P51684 374 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 RHOGP84095 191 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 RBMS2Q15434 407 aaKnown RBP4.76□□□□□ -1.65
CNOT1-204ENST00000563130 IZUMO4Q1ZYL8 232 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 TRIM16LQ309B1 348 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 TMEM128Q5BJH2 165 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 Q6ZRM9 215 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 FAM219AQ8IW50 185 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 FAM223AQ8IWN6 122 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 SELENOHQ8IZQ5 122 aaKnown RBP4.76□□□□□ -1.65
CNOT1-204ENST00000563130 S100ZQ8WXG8 99 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 IL22RA2Q969J5 263 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 LSM10Q969L4 123 aaKnown RBP4.76□□□□□ -1.65
CNOT1-204ENST00000563130 CCDC32Q9BV29 185 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 KCNIP3Q9Y2W7 256 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-204ENST00000563130 NOTCH1P46531 2555 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 IGHV4OR15-8A0A075B7B6 117 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 A0A087WW49 117 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 INS-IGF2F8WCM5 200 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 LINC01619G3V211 115 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 HSPB1P04792 205 aaKnown RBP4.76□□□□□ -1.65
CNOT1-204ENST00000563130 OR8U8P0C7N1 319 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 IGLL1P15814 213 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 AKR1C4P17516 323 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 INPP1P49441 399 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 AKR1C2P52895 323 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 HSPE1P61604 102 aaKnown RBP4.76□□□□□ -1.65
CNOT1-204ENST00000563130 PRCDQ00LT1 54 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 DEFA5Q01523 94 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 BEAN1Q3B7T3 259 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 LRTM2Q8N967 370 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 OR4A16Q8NH70 328 aa4.76□□□□□ -1.65
CNOT1-204ENST00000563130 RANGRFQ9HD47 186 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-204ENST00000563130 A0A0B4J2A0 478 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 C13orf42A0A1B0GVH6 325 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 OR2J3O76001 311 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 TNFRSF6BO95407 300 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 DHFRP00374 187 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 REG1AP05451 166 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 OR13C7P0DN81 318 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 HIST1H1BP16401 226 aaKnown RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 MFAP2P55001 183 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 C15orf32Q32M92 178 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 PDLIM3Q53GG5 364 aaPredicted RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 NMSQ5H8A3 153 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 TMEM268Q5VZI3 342 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 TMED4Q7Z7H5 227 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 SLC35G3Q8N808 338 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 ZNF114Q8NC26 417 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 RRNAD1Q96FB5 475 aaKnown RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 MCRIP2Q9BUT9 160 aaKnown RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 ZMAT4Q9H898 229 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 PEF1Q9UBV8 284 aaKnown RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 SHPKQ9UHJ6 478 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 F11RQ9Y624 299 aaKnown RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 LINC00854A0A1B0GVQ3 168 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 CENPXA8MT69 81 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 ST8SIA3O43173 380 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 LYRM1O43325 122 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 NDUFB8O95169 186 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 TRBV12-3P01733 135 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 ANXA3P12429 323 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 HOXD3P31249 432 aaPredicted RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 SLURP1P55000 103 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 UBE2MP61081 183 aaKnown RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 ATP5G2Q06055 141 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 EGFEM1PQ0D2K5 195 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 PPP1R1AQ13522 171 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms