RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TMEM268Q5VZI3 342 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 CLEC19AQ6UXS0 136 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 ADAMTSL5Q6ZMM2 481 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 OR2C3Q8N628 320 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 ZNF414Q96IQ9 312 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 TMEM56Q96MV1 263 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 TSC22D3Q99576 134 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 ZC4H2Q9NQZ6 224 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 FLVCR2Q9UPI3 526 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 TMEM56-RWDD3S4R434 201 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 F8W735 103 aaPredicted RBP10.6□□□□□ -0.71
TPM1-230ENST00000561266 OR2C1O95371 312 aa10.6□□□□□ -0.71
TPM1-230ENST00000561266 HIST1H1BP16401 226 aaKnown RBP10.6□□□□□ -0.71
TPM1-230ENST00000561266 FAUP35544 74 aaKnown RBP10.6□□□□□ -0.71
TPM1-230ENST00000561266 DHODHQ02127 395 aa10.6□□□□□ -0.71
TPM1-230ENST00000561266 SLC25A24Q6NUK1 477 aa10.6□□□□□ -0.71
TPM1-230ENST00000561266 TMED4Q7Z7H5 227 aa10.6□□□□□ -0.71
TPM1-230ENST00000561266 ZNF429Q86V71 674 aa10.6□□□□□ -0.71
TPM1-230ENST00000561266 SGPP2Q8IWX5 399 aa10.6□□□□□ -0.71
TPM1-230ENST00000561266 RBPMSQ93062 196 aaKnown RBP10.6□□□□□ -0.71
TPM1-230ENST00000561266 PRR25Q96S07 402 aa10.6□□□□□ -0.71
TPM1-230ENST00000561266 FKBP11Q9NYL4 201 aa10.6□□□□□ -0.71
TPM1-230ENST00000561266 K7EIM0 57 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 SAP30O75446 220 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 B3GALNT1O75752 331 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 CSN3P07498 182 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 ZP3P21754 424 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 MECP2P51608 486 aaKnown RBP10.59□□□□□ -0.71
TPM1-230ENST00000561266 ANKRD55Q3KP44 614 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 AARDQ4LEZ3 155 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 TRIQKQ629K1 86 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 THOC7Q6I9Y2 204 aaKnown RBP10.59□□□□□ -0.71
TPM1-230ENST00000561266 LYZL2Q7Z4W2 148 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 SLC35G3Q8N808 338 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 ZNF502Q8TBZ5 544 aa10.59□□□□□ -0.71
TPM1-230ENST00000561266 NXPH3O95157 252 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 IGHV3-48P01763 117 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 CLEC3BP05452 202 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 PPP1R1AQ13522 171 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 RPEL1Q2QD12 228 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 OR9G4Q8NGQ1 327 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 MRAPQ8TCY5 172 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 SCARB1Q8WTV0 552 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 DEDD2Q8WXF8 326 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 EEF1AKMT3Q96AZ1 226 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 RRNAD1Q96FB5 475 aaKnown RBP10.58□□□□□ -0.72
TPM1-230ENST00000561266 SCGB3A2Q96PL1 93 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 CACNG5Q9UF02 275 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 SELENOKQ9Y6D0 94 aa10.58□□□□□ -0.72
TPM1-230ENST00000561266 IGHV3-35A0A0C4DH35 117 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 I3L2K1 104 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 NDUFB6O95139 128 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 DHFRP00374 187 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 RNASE2P10153 161 aaKnown RBP10.57□□□□□ -0.72
TPM1-230ENST00000561266 SPNP16150 400 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 GPR183P32249 361 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 ARL3P36405 182 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 MLANAQ16655 118 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 NMSQ5H8A3 153 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 HSD17B13Q7Z5P4 300 aaPredicted RBP10.57□□□□□ -0.72
TPM1-230ENST00000561266 OR1P1Q8NH06 330 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 SLC25A21Q9BQT8 299 aaPredicted RBP10.57□□□□□ -0.72
TPM1-230ENST00000561266 GPR61Q9BZJ8 451 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 KCNIP3Q9Y2W7 256 aa10.57□□□□□ -0.72
TPM1-230ENST00000561266 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 IZUMO1RA6ND01 250 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 GGCTO75223 188 aaKnown RBP10.56□□□□□ -0.72
TPM1-230ENST00000561266 SFT2D2O95562 160 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 IFNA17P01571 189 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 ADMP35318 185 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 TMEM128Q5BJH2 165 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 PVRIGQ6DKI7 326 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 REC114Q7Z4M0 266 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 FAM219AQ8IW50 185 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 ZNF114Q8NC26 417 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 RNASE11Q8TAA1 199 aaKnown RBP10.56□□□□□ -0.72
TPM1-230ENST00000561266 VN1R17PQ8TDU5 208 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 IL22RA2Q969J5 263 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 CHRDL1Q9BU40 450 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 PLEKHA3Q9HB20 300 aa10.56□□□□□ -0.72
TPM1-230ENST00000561266 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.56□□□□□ -0.72
TPM1-230ENST00000561266 MRPL36Q9P0J6 103 aaKnown RBP10.56□□□□□ -0.72
TPM1-230ENST00000561266 A0A0B4J2A0 478 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 NAP1L6A6NFF2 107 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 OR2T8A6NH00 312 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 INS-IGF2F8WCM5 200 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 ATG12O94817 140 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 IGLV1-51P01701 117 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 INPP1P49441 399 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 INSL3P51460 131 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 RBMS2Q15434 407 aaKnown RBP10.55□□□□□ -0.72
TPM1-230ENST00000561266 CENPSQ8N2Z9 138 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 TMEM170AQ8WVE7 144 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 CACNG8Q8WXS5 425 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 CXorf58Q96LI9 332 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 SHPKQ9UHJ6 478 aa10.55□□□□□ -0.72
TPM1-230ENST00000561266 DNAH9Q9NYC9 4486 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 MT-CO2P00403 227 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms