RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 ZFAND6Q6FIF0 208 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 HAPLN4Q86UW8 402 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 SGPP2Q8IWX5 399 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 OR4A5Q8NH83 315 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 ZNF486Q96H40 463 aaPredicted RBP8.21□□□□□ -1.1
TPM1-227ENST00000560970 SCGB3A2Q96PL1 93 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 FYTTD1Q96QD9 318 aaKnown RBP8.21□□□□□ -1.1
TPM1-227ENST00000560970 RTBDNQ9BSG5 229 aaPredicted RBP8.21□□□□□ -1.1
TPM1-227ENST00000560970 C5orf66Q9H5L9 145 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 SLA2Q9H6Q3 261 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 EDA2RQ9HAV5 297 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 ZNF355PQ9NSJ1 428 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 COA4Q9NYJ1 87 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 NSG2Q9Y328 171 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 DBX1A6NMT0 343 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 H0Y980 276 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 SSNA1O43805 119 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 KRASP01116 189 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 IGLV1-51P01701 117 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 REG1AP05451 166 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 CTSDP07339 412 aaPredicted RBP8.2□□□□□ -1.1
TPM1-227ENST00000560970 ANXA7P20073 488 aaKnown RBP8.2□□□□□ -1.1
TPM1-227ENST00000560970 S100GP29377 79 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 MAS1LP35410 378 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 OR2B8PP59922 312 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 UBE2MP61081 183 aaKnown RBP8.2□□□□□ -1.1
TPM1-227ENST00000560970 ERVK-16P61578 105 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 FCN2Q15485 313 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 ZFP69Q49AA0 526 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 TTC9CQ8N5M4 171 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 ZFAND1Q8TCF1 268 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 SEC22AQ96IW7 307 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 TMEM68Q96MH6 324 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 SPIN2AQ99865 258 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 SPIN2BQ9BPZ2 258 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 ELOVL1Q9BW60 279 aa8.2□□□□□ -1.1
TPM1-227ENST00000560970 FAM212BQ9NTI7 297 aaPredicted RBP8.2□□□□□ -1.1
TPM1-227ENST00000560970 GAR1Q9NY12 217 aaKnown RBP8.2□□□□□ -1.1
TPM1-227ENST00000560970 ALMS1Q8TCU4 4167 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 C3orf85A0A1B0GTC6 90 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 IGLC7A0M8Q6 106 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 A8MZ25 164 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 BRI3O95415 125 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 IGKV1-5P01602 117 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 P0C879 139 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 ANXA3P12429 323 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 ZP3P21754 424 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 SURF2Q15527 256 aaPredicted RBP8.19□□□□□ -1.1
TPM1-227ENST00000560970 IZUMO4Q1ZYL8 232 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 SP6Q3SY56 376 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 CCDC71LQ8N9Z2 235 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 ASB13Q8WXK3 278 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 TMEM230Q96A57 120 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 AIFM2Q9BRQ8 373 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 RANGRFQ9HD47 186 aaPredicted RBP8.19□□□□□ -1.1
TPM1-227ENST00000560970 C19orf73Q9NVV2 129 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 GPR132Q9UNW8 380 aa8.19□□□□□ -1.1
TPM1-227ENST00000560970 TRBV9A0A0B4J1U6 114 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 A0A0G2JRQ6 117 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 CRYM-AS1A6NIL9 109 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 C15orf61A6NNL5 157 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 NPIPB5A8MRT5 1133 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 TRBV12-3P01733 135 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 C1QBP02746 253 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 FGF2P09038 288 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 OR5AC1P0C628 307 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 CTRB1P17538 263 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 UCP1P25874 307 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 RHOGP84095 191 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 C4orf46Q504U0 113 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 CTRB2Q6GPI1 263 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 SLC25A42Q86VD7 318 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 OR11H7Q8NGC8 314 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 OR10W1Q8NGF6 305 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 LHFPL5Q8TAF8 219 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 ZNF431Q8TF32 576 aaPredicted RBP8.18□□□□□ -1.1
TPM1-227ENST00000560970 FANCD2OSQ96PS1 177 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 SEC22CQ9BRL7 303 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 NAA60Q9H7X0 242 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 TMEM14BQ9NUH8 114 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 PRR13Q9NZ81 148 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 C14orf166Q9Y224 244 aaKnown RBP8.18□□□□□ -1.1
TPM1-227ENST00000560970 ZNF257Q9Y2Q1 563 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 DMRT1Q9Y5R6 373 aa8.18□□□□□ -1.1
TPM1-227ENST00000560970 TEX50A0A1B0GTY4 177 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 C13orf42A0A1B0GVH6 325 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 ANKRD34BA5PLL1 514 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 OR2J3O76001 311 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 SERPINE2P07093 398 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 CRYGCP07315 174 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 OR4E1P0C645 316 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 PSMB6P28072 239 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 WT1-ASQ06250 92 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 EXOSC2Q13868 293 aaKnown RBP8.17□□□□□ -1.1
TPM1-227ENST00000560970 ADAMTSL5Q6ZMM2 481 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 TMED4Q7Z7H5 227 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 Q8N1Y9 231 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 QTRT1Q9BXR0 403 aaKnown RBP8.17□□□□□ -1.1
TPM1-227ENST00000560970 COMMD5Q9GZQ3 224 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms