RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	SPTAN1	Q13813	2472 aa	Known RBP	4.71	□□□□□ -1.66
LRRC49-223	ENST00000560369	CACNA1B	Q00975	2339 aa		4.71	□□□□□ -1.66
LRRC49-223	ENST00000560369		A0A0U1RQK1	487 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	GRIFIN	A4D1Z8	144 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	C16orf97	H3BN30	126 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	ZNF705D	P0CH99	300 aa	Predicted RBP	4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	ZNF705B	P0CI00	300 aa	Predicted RBP	4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	CD1B	P29016	333 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	PSMB3	P49720	205 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	LBH	Q53QV2	105 aa	Predicted RBP	4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	ASPHD1	Q5U4P2	390 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	RUSC1-AS1	Q66K80	236 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	ZNF114	Q8NC26	417 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	TMEM18	Q96B42	140 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	FKBP11	Q9NYL4	201 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	WDR83OS	Q9Y284	106 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	CSMD2	Q7Z408	3487 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	IGKV1OR2-108	A0A075B7D4	117 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	TRGV10	A0A0A0MS01	117 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	CTXND1	A0A1B0GTU2	59 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	ZNF320	A2RRD8	509 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	C17orf100	A8MU93	164 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369		E7EQL1	145 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	CA2	P00918	260 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	C1QTNF9	P0C862	333 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	IL3RA	P26951	378 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	PDLIM4	P50479	330 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	CNN1	P51911	297 aa	Known RBP	4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	KRTCAP3	Q53RY4	240 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	COA6	Q5JTJ3	125 aa	Known RBP	4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	TMEM200B	Q69YZ2	307 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	C19orf35	Q6ZS72	473 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	GBGT1	Q8N5D6	347 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	ACY3	Q96HD9	319 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	GGTLC1	Q9BX51	225 aa		4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	SEPSECS	Q9HD40	501 aa	Known RBP	4.7	□□□□□ -1.66
LRRC49-223	ENST00000560369	C15orf61	A6NNL5	157 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369		M0R143	59 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	PRRG2	O14669	202 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	SIAH2	O43255	324 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	LY6H	O94772	140 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	IGFBP2	P18065	325 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	GNB1	P62873	340 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	SSBP2	P81877	361 aa	Predicted RBP	4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	MZT1	Q08AG7	82 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	BATF	Q16520	125 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	IQCJ	Q1A5X6	159 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	AARD	Q4LEZ3	155 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	C10orf55	Q5SWW7	151 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TRAT1	Q6PIZ9	186 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	LHFPL4	Q7Z7J7	247 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	LINC01560	Q8TB33	94 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	H1FX	Q92522	213 aa	Known RBP	4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TBX15	Q96SF7	602 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	IMMP2L	Q96T52	175 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	MRPL20	Q9BYC9	149 aa	Known RBP	4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TIMM9	Q9Y5J7	89 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TRAPPC1	Q9Y5R8	145 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TRBV20OR9-2	A0A075B6H5	130 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	IGHV3-72	A0A0B4J1Y9	119 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	SHISA9	B4DS77	424 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	NPS	P0C0P6	89 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	ARL14EPL	P0DKL9	152 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	APELA	P0DMC3	54 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	CDC34	P49427	236 aa	Predicted RBP	4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	ERVFC1-1	P60608	527 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TEX36	Q5VZQ5	186 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TMEM108	Q6UXF1	575 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	NUP37	Q8NFH4	326 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	PPP1R35	Q8TAP8	253 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	PINX1	Q96BK5	328 aa	Known RBP	4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	MS4A10	Q96PG2	267 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	RBM14	Q96PK6	669 aa	Known RBP	4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TPSG1	Q9NRR2	321 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TMEM14B	Q9NUH8	114 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	JKAMP	Q9P055	326 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	NAGK	Q9UJ70	344 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	PXMP4	Q9Y6I8	212 aa		4.69	□□□□□ -1.66
LRRC49-223	ENST00000560369	TEX50	A0A1B0GTY4	177 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	C11orf94	C9JXX5	98 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	TMEM178B	H3BS89	294 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	GGCT	O75223	188 aa	Known RBP	4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	ACTL6B	O94805	426 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	CHRNB4	P30926	498 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	RAB4B	P61018	213 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	RPL15	P61313	204 aa	Known RBP	4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	ERVK-16	P61578	105 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	RPL31	P62899	125 aa	Known RBP	4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	ATP6V1F	Q16864	119 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	SLC25A48	Q6ZT89	311 aa	Known RBP	4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	TCTEX1D1	Q8N7M0	179 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	ZNF709	Q8N972	641 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	OR4S2	Q8NH73	311 aa		4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	CIB3	Q96Q77	187 aa	Predicted RBP	4.68	□□□□□ -1.66
LRRC49-223	ENST00000560369	TMEM208	Q9BTX3	173 aa		4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms