RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 FCGR3BO75015 233 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 KBTBD11O94819 623 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 DHFRP00374 187 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 REG1AP05451 166 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 RBMY1A1P0DJD3 496 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 RBMY1CP0DJD4 496 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 HLA-DMBP28068 263 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 RBMY1FQ15415 496 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 PVRIGQ6DKI7 326 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 Q6ZTC4 211 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 SNX29P2Q8IUI4 249 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 LYSMD2Q8IV50 215 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 MAPKAPK5-AS1Q8N8E1 139 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 Q8NAQ8 132 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 ABHD1Q96SE0 405 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 DCUN1D5Q9BTE7 237 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 RNF126Q9BV68 326 aa9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 DAZ1Q9NQZ3 744 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 CCDC59Q9P031 241 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 RBM7Q9Y580 266 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-213ENST00000560127 CA1P00915 261 aaPredicted RBP9.29□□□□□ -0.92
RABGGTA-213ENST00000560127 CTXN2P0C2S0 81 aa9.29□□□□□ -0.92
RABGGTA-213ENST00000560127 TMEM187Q14656 261 aa9.29□□□□□ -0.92
RABGGTA-213ENST00000560127 SSX9Q7RTT3 188 aa9.29□□□□□ -0.92
RABGGTA-213ENST00000560127 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-213ENST00000560127 TMEM167AQ8TBQ9 72 aa9.29□□□□□ -0.92
RABGGTA-213ENST00000560127 OR2A7Q96R45 310 aa9.29□□□□□ -0.92
RABGGTA-213ENST00000560127 FXYD6Q9H0Q3 95 aa9.29□□□□□ -0.92
RABGGTA-213ENST00000560127 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-213ENST00000560127 CGB1A6NKQ9 187 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 TGOLN2O43493 480 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 CDK2AP2O75956 126 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 PPYP01298 95 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 P0DMU3 169 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 FAM231AP0DMU4 169 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 FAM231CP0DMU5 169 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 DEFA4P12838 97 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 FCGR2CP31995 323 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 PRSS3P35030 304 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 MAS1LP35410 378 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 CBX5P45973 191 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 RFX2P48378 723 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 ARPC4P59998 168 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 RNASE12Q5GAN4 147 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 OR2B11Q5JQS5 317 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 OR5AP2Q8NGF4 316 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 NXF2Q9GZY0 626 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 CCL28Q9NRJ3 127 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 EXTL2Q9UBQ6 330 aa9.28□□□□□ -0.92
RABGGTA-213ENST00000560127 IGHV3OR16-8A0A075B7F1 116 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 IGHV4-28A0A0C4DH34 117 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 ZNF207O43670 478 aaKnown RBP9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 PMP2P02689 132 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 AMBPP02760 352 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 PTBP1P26599 531 aaKnown RBP eCLIP9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 Q6ZR54 194 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 OR52I2Q8NH67 350 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 AP3S1Q92572 193 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 RNF2Q99496 336 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 CHRDL1Q9BU40 450 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 SCPEP1Q9HB40 452 aa9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 MRPS7Q9Y2R9 242 aaKnown RBP9.27□□□□□ -0.93
RABGGTA-213ENST00000560127 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 OR2T8A6NH00 312 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 C15orf61A6NNL5 157 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 FAM25AB3EWG3 89 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 FAM25CB3EWG5 89 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 FAM25GB3EWG6 89 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 HLA-DMAP28067 261 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 HRH1P35367 487 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 TFPI2P48307 235 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 MZT2AQ6P582 158 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 KCTD9Q7L273 389 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 VSTM2AQ8TAG5 236 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 SECTM1Q8WVN6 248 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 GIMAP1Q8WWP7 306 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 SOSTQ9BQB4 213 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 C20orf24Q9BUV8 137 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 IFT46Q9NQC8 304 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 EHFQ9NZC4 300 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 KLK11Q9UBX7 282 aa9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 SRRM2Q9UQ35 2752 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-213ENST00000560127 IGLV2-18A0A075B6J9 118 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 K7EMT4 169 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 NDUFA4O00483 81 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 TNFSF12O43508 249 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 GNRHRP30968 328 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 FXYD4P59646 89 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 RPL8P62917 257 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 DHRS11Q6UWP2 260 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 ZNF818PQ6ZRF7 136 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 MOB3AQ96BX8 217 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 SCRT1Q9BWW7 348 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 TAS2R8Q9NYW2 309 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 PRELID3BQ9Y3B1 194 aa9.25□□□□□ -0.93
RABGGTA-213ENST00000560127 IGKV3-7A0A075B6H7 116 aa9.24□□□□□ -0.93
RABGGTA-213ENST00000560127 DEFB131BA0A096LNP1 70 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms