RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 C2orf83Q53S99 150 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 C8orf31Q8N9H6 132 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 TMEM186Q96B77 213 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 FLYWCH2Q96CP2 140 aaKnown RBP8.96□□□□□ -0.98
SPG11-217ENST00000559511 DERL1Q9BUN8 251 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 FKBP11Q9NYL4 201 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 TRBV24-1A0A075B6N3 115 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 A0A087X0M5 115 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 A0A1B0GX30 115 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 FNDC10F2Z333 226 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 PDE6DO43924 150 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 LINC00869P0C866 280 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 IGHV1-8P0DP01 117 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 DLX1P56177 255 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 RPL8P62917 257 aaKnown RBP8.95□□□□□ -0.98
SPG11-217ENST00000559511 MLANAQ16655 118 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 ZNF672Q499Z4 452 aaPredicted RBP8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
SPG11-217ENST00000559511 FAM71F2Q6NXP2 309 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 MUC15Q8N387 334 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 NECAP1Q8NC96 275 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 OR4C13Q8NGP0 309 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 TMEM204Q9BSN7 226 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 NDUFA4L2Q9NRX3 87 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 TPRP12270 2363 aaKnown RBP8.95□□□□□ -0.98
SPG11-217ENST00000559511 MALRD1Q5VYJ5 2156 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 FOXH1O75593 365 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 NDUFB4O95168 129 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 IGLV2-23P01705 113 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 PFN1P07737 140 aaKnown RBP8.95□□□□□ -0.98
SPG11-217ENST00000559511 ZNF137PP52743 207 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 RHOBP62745 196 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 RAB31Q13636 194 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 GAMTQ14353 236 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 PDPNQ86YL7 162 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 OR1L8Q8NGR8 309 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 OR9G1Q8NH87 305 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 RITA1Q96K30 269 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 ELOVL1Q9BW60 279 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 COMMD5Q9GZQ3 224 aa8.95□□□□□ -0.98
SPG11-217ENST00000559511 SPTBN1Q01082 2364 aaKnown RBP8.94□□□□□ -0.98
SPG11-217ENST00000559511 CGB1A6NKQ9 187 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 PHOX2AO14813 284 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 CLN5O75503 358 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 VENTXO95231 258 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 S100A8P05109 93 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 GCHFRP30047 84 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 NDUFA6P56556 154 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 PRB3Q04118 309 aaPredicted RBP8.94□□□□□ -0.98
SPG11-217ENST00000559511 C10orf55Q5SWW7 151 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 TMEM144Q7Z5S9 345 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 TMEM167AQ8TBQ9 72 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 AURKAIP1Q9NWT8 199 aaPredicted RBP8.94□□□□□ -0.98
SPG11-217ENST00000559511 DOK5Q9P104 306 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 SLC45A2Q9UMX9 530 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 WASHC3Q9Y3C0 194 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 YTHDF2Q9Y5A9 579 aaKnown RBP8.94□□□□□ -0.98
SPG11-217ENST00000559511 PKD1L2Q7Z442 2459 aa8.94□□□□□ -0.98
SPG11-217ENST00000559511 PGPEP1LA6NFU8 196 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 IFITM10A6NMD0 228 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 H7BYZ3 331 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 ACTL6BO94805 426 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 USF1P22415 310 aaPredicted RBP8.93□□□□□ -0.98
SPG11-217ENST00000559511 GATA2P23769 480 aaPredicted RBP8.93□□□□□ -0.98
SPG11-217ENST00000559511 MIR17HGQ75NE6 70 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 SLC16A13Q7RTY0 426 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 LINC01551Q86U37 167 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 TGIF2LXQ8IUE1 241 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 OR5T1Q8NG75 326 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 FRZBQ92765 325 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 TMEM133Q9H2Q1 129 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 TPSG1Q9NRR2 321 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 TRBV20OR9-2A0A075B6H5 130 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 SCO2A0A1W2PP80 73 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 F6UZH7 168 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 HOXA5P20719 270 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 GALR1P47211 349 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 ATP5IP56385 69 aaPredicted RBP8.93□□□□□ -0.98
SPG11-217ENST00000559511 WT1-ASQ06250 92 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 CD69Q07108 199 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 FAM78BQ5VT40 261 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 ZNF114Q8NC26 417 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 OR4P4Q8NGL7 312 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
SPG11-217ENST00000559511 ZNF430Q9H8G1 570 aaPredicted RBP8.93□□□□□ -0.98
SPG11-217ENST00000559511 ASH1LQ9NR48 2969 aaKnown RBP8.92□□□□□ -0.98
SPG11-217ENST00000559511 TRBV23-1A0A0A0MS06 115 aa8.92□□□□□ -0.98
SPG11-217ENST00000559511 IGHV3-72A0A0B4J1Y9 119 aa8.92□□□□□ -0.98
SPG11-217ENST00000559511 TRGC1P0CF51 173 aa8.92□□□□□ -0.98
SPG11-217ENST00000559511 SMIM6P0DI80 62 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms