RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 RPP30P78346 268 aaKnown RBP13.16□□□□□ -0.3
TPM1-219ENST00000559397 SLC38A11Q08AI6 406 aa13.16□□□□□ -0.3
TPM1-219ENST00000559397 ATP6V1FQ16864 119 aa13.16□□□□□ -0.3
TPM1-219ENST00000559397 RBMS3Q6XE24 437 aaKnown RBP13.16□□□□□ -0.3
TPM1-219ENST00000559397 TMEM86BQ8N661 226 aa13.16□□□□□ -0.3
TPM1-219ENST00000559397 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
TPM1-219ENST00000559397 OR2T10Q8NGZ9 312 aa13.16□□□□□ -0.3
TPM1-219ENST00000559397 INS-IGF2F8WCM5 200 aa13.15□□□□□ -0.3
TPM1-219ENST00000559397 ATP6V0CP27449 155 aa13.15□□□□□ -0.3
TPM1-219ENST00000559397 HES1Q14469 280 aa13.15□□□□□ -0.3
TPM1-219ENST00000559397 LY6EQ16553 131 aa13.15□□□□□ -0.3
TPM1-219ENST00000559397 OR10P1Q8NGE3 313 aa13.15□□□□□ -0.3
TPM1-219ENST00000559397 OR1L8Q8NGR8 309 aa13.15□□□□□ -0.3
TPM1-219ENST00000559397 ZNF418Q8TF45 676 aaPredicted RBP13.15□□□□□ -0.3
TPM1-219ENST00000559397 TMEM170AQ8WVE7 144 aa13.15□□□□□ -0.3
TPM1-219ENST00000559397 PINX1Q96BK5 328 aaKnown RBP13.15□□□□□ -0.3
TPM1-219ENST00000559397 GNPNAT1Q96EK6 184 aaPredicted RBP13.15□□□□□ -0.3
TPM1-219ENST00000559397 SAT2Q96F10 170 aaPredicted RBP13.15□□□□□ -0.3
TPM1-219ENST00000559397 SH3BGRL3Q9H299 93 aa13.15□□□□□ -0.3
TPM1-219ENST00000559397 ZNF430Q9H8G1 570 aaPredicted RBP13.15□□□□□ -0.3
TPM1-219ENST00000559397 NDUFA4L2Q9NRX3 87 aa13.15□□□□□ -0.3
TPM1-219ENST00000559397 SLC25A17O43808 307 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 IFNA5P01569 189 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 OR8U8P0C7N1 319 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 HILS1P60008 231 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 HNF4GQ14541 408 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 PSG5Q15238 335 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 VWC2Q2TAL6 325 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 OR8G2PQ6IF36 304 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 COMMD7Q86VX2 200 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 PLEKHA3Q9HB20 300 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 VPREB3Q9UKI3 123 aa13.15□□□□□ -0.31
TPM1-219ENST00000559397 DNAJC9-AS1A6NH13 148 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 IFNA10P01566 189 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 TMEM11P17152 192 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 S100A1P23297 94 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 TMEM219Q86XT9 240 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 LILRB2Q8N423 598 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 RBM14Q96PK6 669 aaKnown RBP13.14□□□□□ -0.31
TPM1-219ENST00000559397 TMEM147Q9BVK8 224 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 COMMD5Q9GZQ3 224 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 ENY2Q9NPA8 101 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 TPSG1Q9NRR2 321 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 TNFRSF19Q9NS68 423 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 PITPNC1Q9UKF7 332 aa13.14□□□□□ -0.31
TPM1-219ENST00000559397 BTBD17A6NE02 478 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 PRSS46E5RG02 174 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 CLDN34H7C241 214 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 RRHO14718 337 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 CNTFRP26992 372 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 RAB5CP51148 216 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 F2RL1P55085 397 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
TPM1-219ENST00000559397 PRSS8Q16651 343 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 DUX5Q96PT3 197 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 SIGLEC9Q9Y336 463 aa13.13□□□□□ -0.31
TPM1-219ENST00000559397 CGB1A6NKQ9 187 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 ZNF705EA8MWA4 302 aaPredicted RBP13.12□□□□□ -0.31
TPM1-219ENST00000559397 MMD2Q8IY49 270 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 NPBQ8NG41 125 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 SLC25A33Q9BSK2 321 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 HINT2Q9BX68 163 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 WDR61Q9GZS3 305 aaKnown RBP13.12□□□□□ -0.31
TPM1-219ENST00000559397 E7EUB6 86 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 OPN1MWP04001 364 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 OPN1MW2P0DN77 364 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 OPN1MW3P0DN78 364 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 MDKP21741 143 aaPredicted RBP13.12□□□□□ -0.31
TPM1-219ENST00000559397 NPY1RP25929 384 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 MAS1LP35410 378 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 RAB11AP62491 216 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 RUNX1Q01196 453 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 PJVKQ0ZLH3 352 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 ETV3LQ6ZN32 361 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 C16orf82Q7Z2V1 217 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 SCGB1C1Q8TD33 95 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 UQCC1Q9NVA1 299 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 PFDN2Q9UHV9 154 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 RFNGQ9Y644 331 aa13.12□□□□□ -0.31
TPM1-219ENST00000559397 A0A1B0GW64 132 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 A0A1W2PN81 502 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 UMAD1C9J7I0 102 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 TCF21O43680 179 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 NDUFA3O95167 84 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 CA2P00918 260 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 CHRNA7P36544 502 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 BLOC1S1P78537 153 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 CENPVQ7Z7K6 275 aaPredicted RBP13.11□□□□□ -0.31
TPM1-219ENST00000559397 TAF15Q92804 592 aaKnown RBP eCLIP13.11□□□□□ -0.31
TPM1-219ENST00000559397 CITED4Q96RK1 184 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 JMJD8Q96S16 334 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 PSMG3Q9BT73 122 aaPredicted RBP13.11□□□□□ -0.31
TPM1-219ENST00000559397 PARP11Q9NR21 331 aa13.11□□□□□ -0.31
TPM1-219ENST00000559397 TRIM77I1YAP6 450 aa13.1□□□□□ -0.31
TPM1-219ENST00000559397 NBR2O15453 112 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms