RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ZNF815PA8K554 130 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 FOXS1O43638 330 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 KLF17Q5JT82 389 aaPredicted RBP9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 MIR17HGQ75NE6 70 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 MDP1Q86V88 176 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 VKORC1Q9BQB6 163 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 BRWD3Q6RI45 1802 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 K7EP13 123 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 PRTN3P24158 256 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 PEBP1P30086 187 aaKnown RBP9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 CD300EQ496F6 205 aaPredicted RBP9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 C9orf153Q5TBE3 101 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 NEUROG3Q9Y4Z2 214 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 KNTC1P50748 2209 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 MOSP00540 346 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 CTHRC1Q96CG8 243 aa9.95□□□□□ -0.82
CSPG4P12-201ENST00000558282 F8W1H4 67 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 F2RL2O00254 374 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 TNFRSF6BO95407 300 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 SLC25A48Q6ZT89 311 aaKnown RBP9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 FAM89BQ8N5H3 189 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 ARPC1AQ92747 370 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 ZDHHC16Q969W1 377 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 TMEM101Q96IK0 257 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 WDR83OSQ9Y284 106 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 THY1P04216 161 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 SUMO2P61956 95 aaKnown RBP9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 LHX8Q68G74 356 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 RPRMLQ8N4K4 120 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 PROB1E7EW31 1015 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 MLNRO43193 412 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 TMEM155Q4W5P6 130 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 LHFPL1Q86WI0 220 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 NRXN2Q9P2S2 1712 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 RGPD3A6NKT7 1758 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 RGPD4Q7Z3J3 1758 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 TRAV2A0A0B4J234 112 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 C9orf118A6NHY6 69 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 PPIHO43447 177 aaKnown RBP9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 IGLC2P0DOY2 106 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 IGLC3P0DOY3 106 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 MYF5P13349 255 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 TEX45Q8NA69 505 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 OSR1Q8TAX0 266 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 HES7Q9BYE0 225 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 CRIM1Q9NZV1 1036 aa9.94□□□□□ -0.82
CSPG4P12-201ENST00000558282 IGKV1-8A0A0C4DH67 115 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 TMEM229AB2RXF0 380 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 ZIC3O60481 467 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 REG1BP48304 166 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 TRIP11Q15643 1979 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 TMEM238C9JI98 176 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 NAA38Q9BRA0 125 aaKnown RBP9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 EPDR1Q9UM22 224 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 TSSC4Q9Y5U2 329 aaPredicted RBP9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 A0A0J9YW62 118 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 UCP2P55851 309 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 LILRA6Q6PI73 481 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 CHTOPQ9Y3Y2 248 aaKnown RBP9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 SLC25A15Q9Y619 301 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 APELAP0DMC3 54 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 IL9P15248 144 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 SPINK2P20155 84 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 MORN3Q6PF18 240 aaPredicted RBP9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 ZNF562Q6V9R5 426 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 C1QL2Q7Z5L3 287 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 RNF182Q8N6D2 247 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 NRTNQ99748 197 aa9.93□□□□□ -0.82
CSPG4P12-201ENST00000558282 COL11A2P13942 1736 aaPredicted RBP9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 hDV102S1A0JD36 115 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 FAM231BA6NCW3 169 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 FAM90A9PA6NNJ1 464 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 IFNL4K9M1U5 179 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 SRFP11831 508 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 ASIPP42127 132 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 GAS1P54826 345 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 EDA2RQ9HAV5 297 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 PILRAQ9UKJ1 303 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 FOCADQ5VW36 1801 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 TRBV7-9A0A0J9YWB2 115 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 K7EP34 96 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 CCL3P10147 92 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 ZNF56Q15929 161 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 CLEC2AQ6UVW9 174 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 WFDC3Q8IUB2 231 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 SMAD7O15105 426 aaKnown RBP9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 HTN1P15515 57 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 LCN12Q6JVE5 192 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 PPDPFLQ8WWR9 84 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 Q9H3A6 140 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 GP6Q9HCN6 339 aa9.92□□□□□ -0.82
CSPG4P12-201ENST00000558282 IGHV3OR15-7A0A075B7D8 119 aa9.91□□□□□ -0.82
CSPG4P12-201ENST00000558282 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
CSPG4P12-201ENST00000558282 ANKRD31Q8N7Z5 1873 aa9.91□□□□□ -0.82
CSPG4P12-201ENST00000558282 A0A1W2PRD5 423 aa9.91□□□□□ -0.82
CSPG4P12-201ENST00000558282 A0A1W2PRF3 423 aa9.91□□□□□ -0.82
CSPG4P12-201ENST00000558282 A0A1W2PRM7 423 aa9.91□□□□□ -0.82
CSPG4P12-201ENST00000558282 H3BTX0 84 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms