RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 SLC16A13Q7RTY0 426 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 LHFPL5Q8TAF8 219 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 PRR13Q9NZ81 148 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 FOXA2Q9Y261 457 aaPredicted RBP9.77□□□□□ -0.85
TMEM260-215ENST00000557626 TXNL1O43396 289 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 PTTG1O95997 202 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 IGLV2-23P01705 113 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 MFAP2P55001 183 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 APOC4P55056 127 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 DEFA1P59665 94 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 DEFA3P59666 94 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 PPP1R1AQ13522 171 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 KCTD9Q7L273 389 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 TMED4Q7Z7H5 227 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 CENPSQ8N2Z9 138 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 GLYATL2Q8WU03 294 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 TCTEX1D2Q8WW35 142 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 RHOVQ96L33 236 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 MARVELD1Q9BSK0 173 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 NAA60Q9H7X0 242 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 SLC35D1Q9NTN3 355 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 NUBP2Q9Y5Y2 271 aa9.76□□□□□ -0.85
TMEM260-215ENST00000557626 FCGR3BO75015 233 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 H2AFB2P0C5Z0 115 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 OR5AC1P0C628 307 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 AKR1C4P17516 323 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 UCP1P25874 307 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 TPPP2P59282 170 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 TMEM187Q14656 261 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 ANKRD55Q3KP44 614 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 C1orf134Q5TEV5 83 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 Q5VSD8 79 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 CMTM1Q8IZ96 169 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 SPAG16Q8N0X2 631 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 ENKURQ8TC29 256 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 GALNT14Q96FL9 552 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 ADTRPQ96IZ2 230 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 ZNF355PQ9NSJ1 428 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 COPZ2Q9P299 210 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 C14orf166Q9Y224 244 aaKnown RBP9.75□□□□□ -0.85
TMEM260-215ENST00000557626 WASHC3Q9Y3C0 194 aa9.75□□□□□ -0.85
TMEM260-215ENST00000557626 C3orf85A0A1B0GTC6 90 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 RBFOX2O43251 390 aaKnown RBP eCLIP9.74□□□□□ -0.85
TMEM260-215ENST00000557626 S1PR2O95136 353 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 CRYGBP07316 175 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 P0DMU3 169 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 FAM231AP0DMU4 169 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 FAM231CP0DMU5 169 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 MC5RP33032 325 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 KIR2DS2P43631 304 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 LPAR6P43657 344 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 TATDN3Q17R31 274 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 TMEM128Q5BJH2 165 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 Q6ZR54 194 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 OR52B4Q8NGK2 314 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 MS4A10Q96PG2 267 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 SCGB3A2Q96PL1 93 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 SEC22CQ9BRL7 303 aa9.74□□□□□ -0.85
TMEM260-215ENST00000557626 IGLV2-18A0A075B6J9 118 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 IGHV4-4A0A075B6R2 117 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 IGHV7-81A0A0B4J1V7 117 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 TEX13DA0A0J9YY54 714 aaPredicted RBP9.73□□□□□ -0.85
TMEM260-215ENST00000557626 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 ANKRD34BA5PLL1 514 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 C11orf94C9JXX5 98 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 SFT2D2O95562 160 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 CRYZL1O95825 349 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 HLA-DRB1P01911 266 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 IL6RP08887 468 aaPredicted RBP9.73□□□□□ -0.85
TMEM260-215ENST00000557626 OR4E1P0C645 316 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 P0C879 139 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 TNP2Q05952 138 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 DHRS2Q13268 280 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 MMDQ15546 238 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 RGS21Q2M5E4 152 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 PDPNQ86YL7 162 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 VKORC1L1Q8N0U8 176 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 CCDC71LQ8N9Z2 235 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 TMEM222Q9H0R3 208 aa9.73□□□□□ -0.85
TMEM260-215ENST00000557626 FAM212BQ9NTI7 297 aaPredicted RBP9.73□□□□□ -0.85
TMEM260-215ENST00000557626 A0A0G2JRQ6 117 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 INMT-MINDY4F8WBC2 141 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 H7C2Y5 167 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 UBE2CO00762 179 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 NDUFA3O95167 84 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 CDS2O95674 445 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 IGKV1-5P01602 117 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 IL5P05113 134 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 UBE2MP61081 183 aaKnown RBP9.72□□□□□ -0.85
TMEM260-215ENST00000557626 SSBP2P81877 361 aaPredicted RBP9.72□□□□□ -0.85
TMEM260-215ENST00000557626 TAGLNQ01995 201 aaKnown RBP9.72□□□□□ -0.85
TMEM260-215ENST00000557626 CATR1Q13166 79 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 PSG5Q15238 335 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 POU2AF1Q16633 256 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 C19orf54Q5BKX5 351 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 PLET1Q6UQ28 207 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 SELENOHQ8IZQ5 122 aaKnown RBP9.72□□□□□ -0.85
TMEM260-215ENST00000557626 TCTEX1D1Q8N7M0 179 aa9.72□□□□□ -0.85
TMEM260-215ENST00000557626 NPBQ8NG41 125 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms