RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 BCL7BQ9BQE9 202 aa13.9□□□□□ -0.18
NEDD1-209ENST00000557092 NEURL2Q9BR09 285 aa13.9□□□□□ -0.18
NEDD1-209ENST00000557092 PLEKHA3Q9HB20 300 aa13.9□□□□□ -0.18
NEDD1-209ENST00000557092 CCDC59Q9P031 241 aaKnown RBP13.9□□□□□ -0.18
NEDD1-209ENST00000557092 COPZ2Q9P299 210 aa13.9□□□□□ -0.18
NEDD1-209ENST00000557092 ZNF785A8K8V0 405 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 AKR1C2P52895 323 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 SSBP1Q04837 148 aaKnown RBP13.89□□□□□ -0.19
NEDD1-209ENST00000557092 IL18Q14116 193 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 TM4SF20Q53R12 229 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 ZNF57Q68EA5 555 aaPredicted RBP13.89□□□□□ -0.19
NEDD1-209ENST00000557092 CCDC71LQ8N9Z2 235 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 UBAC2Q8NBM4 344 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 OR13C8Q8NGS7 320 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 TERB2Q8NHR7 220 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 DYNC2LI1Q8TCX1 351 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 TP53RKQ96S44 253 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 TM2D3Q9BRN9 247 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 C6orf62Q9GZU0 229 aaPredicted RBP13.89□□□□□ -0.19
NEDD1-209ENST00000557092 C21orf62Q9NYP8 219 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 MLXQ9UH92 298 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 UFC1Q9Y3C8 167 aa13.89□□□□□ -0.19
NEDD1-209ENST00000557092 STAB2Q8WWQ8 2551 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 C3orf85A0A1B0GTC6 90 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 CD7P09564 240 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 RPL5P46777 297 aaKnown RBP13.88□□□□□ -0.19
NEDD1-209ENST00000557092 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 Q56UQ5 140 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 FAAP20Q6NZ36 180 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 BTNL8Q6UX41 500 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 OR1P1Q8NH06 330 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 SCARB1Q8WTV0 552 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 SMIM4Q8WVI0 70 aa13.88□□□□□ -0.19
NEDD1-209ENST00000557092 BSCL2Q96G97 398 aaPredicted RBP13.88□□□□□ -0.19
NEDD1-209ENST00000557092 K7EIM0 57 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 ATG12O94817 140 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 HSPE1P61604 102 aaKnown RBP13.87□□□□□ -0.19
NEDD1-209ENST00000557092 PRCDQ00LT1 54 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 MEF2DQ14814 521 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 HAGHQ16775 308 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 IZUMO4Q1ZYL8 232 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 TMEM61Q8N0U2 210 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 OR2C3Q8N628 320 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 MARCH1Q8TCQ1 289 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 MARC2Q969Z3 335 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 MISP3Q96FF7 219 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 SPATA25Q9BR10 227 aa13.87□□□□□ -0.19
NEDD1-209ENST00000557092 ZNF436Q9C0F3 470 aaPredicted RBP13.87□□□□□ -0.19
NEDD1-209ENST00000557092 DISC1C4P0D8 188 aa13.86□□□□□ -0.19
NEDD1-209ENST00000557092 SCAF4O95104 1147 aaKnown RBP13.86□□□□□ -0.19
NEDD1-209ENST00000557092 IGKV1-5P01602 117 aa13.86□□□□□ -0.19
NEDD1-209ENST00000557092 CTSDP07339 412 aaPredicted RBP13.86□□□□□ -0.19
NEDD1-209ENST00000557092 ELLP55199 621 aaPredicted RBP13.86□□□□□ -0.19
NEDD1-209ENST00000557092 ERHP84090 104 aaKnown RBP13.86□□□□□ -0.19
NEDD1-209ENST00000557092 SP6Q3SY56 376 aa13.86□□□□□ -0.19
NEDD1-209ENST00000557092 SPINK9Q5DT21 86 aa13.86□□□□□ -0.19
NEDD1-209ENST00000557092 SPSB3Q6PJ21 355 aa13.86□□□□□ -0.19
NEDD1-209ENST00000557092 RNASE11Q8TAA1 199 aaKnown RBP13.86□□□□□ -0.19
NEDD1-209ENST00000557092 TMEM190Q8WZ59 177 aa13.86□□□□□ -0.19
NEDD1-209ENST00000557092 WFDC10AQ9H1F0 79 aa13.86□□□□□ -0.19
NEDD1-209ENST00000557092 RABL2AQ9UBK7 228 aaPredicted RBP13.86□□□□□ -0.19
NEDD1-209ENST00000557092 RABL2BQ9UNT1 228 aa13.86□□□□□ -0.19
NEDD1-209ENST00000557092 C14orf166Q9Y224 244 aaKnown RBP13.86□□□□□ -0.19
NEDD1-209ENST00000557092 OR11H12B2RN74 326 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 H3BMQ9 156 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 C3orf84H3BNL1 204 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 AKAIN1P0CW23 69 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 SLC16A13Q7RTY0 426 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 DEFB125Q8N687 156 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 SLC35G3Q8N808 338 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 ISOC1Q96CN7 298 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 CHRDL1Q9BU40 450 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 C20orf24Q9BUV8 137 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 SRD5A3Q9H8P0 318 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 MRPL27Q9P0M9 148 aaKnown RBP13.85□□□□□ -0.19
NEDD1-209ENST00000557092 CEPT1Q9Y6K0 416 aa13.85□□□□□ -0.19
NEDD1-209ENST00000557092 CTDSPLO15194 276 aa13.84□□□□□ -0.19
NEDD1-209ENST00000557092 C8orf88P0DMB2 117 aa13.84□□□□□ -0.19
NEDD1-209ENST00000557092 RBPMS2Q6ZRY4 209 aaKnown RBP13.84□□□□□ -0.19
NEDD1-209ENST00000557092 ZNF114Q8NC26 417 aa13.84□□□□□ -0.19
NEDD1-209ENST00000557092 OR52B4Q8NGK2 314 aa13.84□□□□□ -0.19
NEDD1-209ENST00000557092 OR4C16Q8NGL9 310 aa13.84□□□□□ -0.19
NEDD1-209ENST00000557092 MUC7Q8TAX7 377 aa13.84□□□□□ -0.19
NEDD1-209ENST00000557092 PINX1Q96BK5 328 aaKnown RBP13.84□□□□□ -0.19
NEDD1-209ENST00000557092 RRNAD1Q96FB5 475 aaKnown RBP13.84□□□□□ -0.19
NEDD1-209ENST00000557092 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
NEDD1-209ENST00000557092 GAR1Q9NY12 217 aaKnown RBP13.84□□□□□ -0.19
NEDD1-209ENST00000557092 TEX13DA0A0J9YY54 714 aaPredicted RBP13.83□□□□□ -0.2
NEDD1-209ENST00000557092 F8W735 103 aaPredicted RBP13.83□□□□□ -0.2
NEDD1-209ENST00000557092 NDUFA4O00483 81 aa13.83□□□□□ -0.2
NEDD1-209ENST00000557092 IFNA17P01571 189 aa13.83□□□□□ -0.2
NEDD1-209ENST00000557092 UCP1P25874 307 aa13.83□□□□□ -0.2
NEDD1-209ENST00000557092 ADMP35318 185 aa13.83□□□□□ -0.2
NEDD1-209ENST00000557092 SLIRPQ9GZT3 109 aaKnown RBP13.83□□□□□ -0.2
NEDD1-209ENST00000557092 DAZ1Q9NQZ3 744 aaKnown RBP13.83□□□□□ -0.2
NEDD1-209ENST00000557092 IGHV3OR16-8A0A075B7F1 116 aa13.82□□□□□ -0.2
NEDD1-209ENST00000557092 TRAV25A0A0B4J276 109 aa13.82□□□□□ -0.2
NEDD1-209ENST00000557092 A0A0B4J293 547 aa13.82□□□□□ -0.2
NEDD1-209ENST00000557092 I3L2K1 104 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms