RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 TCTEX1D2Q8WW35 142 aa9.35□□□□□ -0.91
SHMT2-223ENST00000556689 GALNT14Q96FL9 552 aa9.35□□□□□ -0.91
SHMT2-223ENST00000556689 HSD17B10Q99714 261 aaKnown RBP9.35□□□□□ -0.91
SHMT2-223ENST00000556689 ZNF436Q9C0F3 470 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-223ENST00000556689 MAP6D1Q9H9H5 199 aa9.35□□□□□ -0.91
SHMT2-223ENST00000556689 THYN1Q9P016 225 aa9.35□□□□□ -0.91
SHMT2-223ENST00000556689 HECTD4Q9Y4D8 3996 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 GSTZ1O43708 216 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-223ENST00000556689 HLA-GP17693 338 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 TBPP20226 339 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 BRWD1-AS2P59051 145 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 RPL8P62917 257 aaKnown RBP9.34□□□□□ -0.91
SHMT2-223ENST00000556689 SSX9Q7RTT3 188 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 MFSD4AQ8N468 514 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 TOMM5Q8N4H5 51 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 C11orf45Q8TAV5 145 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 ZNF502Q8TBZ5 544 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 DEDD2Q8WXF8 326 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 RARRES2Q99969 163 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 AIFM2Q9BRQ8 373 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 SRRQ9GZT4 340 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 MFFQ9GZY8 342 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 FBXL17Q9UF56 701 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 RYR1P21817 5038 aa9.34□□□□□ -0.91
SHMT2-223ENST00000556689 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 RPA2P15927 270 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 FCGR2BP31994 310 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-223ENST00000556689 TAS2R19P59542 299 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 NANOS2P60321 138 aaKnown RBP9.33□□□□□ -0.92
SHMT2-223ENST00000556689 PRR20EP86478 221 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 PRR20CP86479 221 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 PRR20DP86480 221 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 PRR20BP86481 221 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 PRR20AP86496 221 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 RBMS2Q15434 407 aaKnown RBP9.33□□□□□ -0.92
SHMT2-223ENST00000556689 ZNF79Q15937 498 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 ODF3L2Q3SX64 289 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 OR4A5Q8NH83 315 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 CSTL1Q9H114 145 aa9.33□□□□□ -0.92
SHMT2-223ENST00000556689 IGKV1D-13A0A0B4J2D9 117 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 MEIS3P1A6NDR6 274 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 CGB1A6NKQ9 187 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 MPTX1A8MV57 137 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 CYB5BO43169 146 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 TGOLN2O43493 480 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 IGKV1-13P0DP09 117 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 TCTAP57738 103 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 OR2B8PP59922 312 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 EIF4EBP1Q13541 118 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-223ENST00000556689 MEF2DQ14814 521 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 RNASE10Q5GAN6 216 aaKnown RBP9.32□□□□□ -0.92
SHMT2-223ENST00000556689 MZT2BQ6NZ67 158 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 ZNF66Q6ZN08 573 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 TMEM17Q86X19 198 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 BEST4Q8NFU0 473 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 OR5H2Q8NGV7 314 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 OR52I2Q8NH67 350 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 VN1R17PQ8TDU5 208 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 GPX8Q8TED1 209 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 C2CD4CQ8TF44 421 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 TMEM190Q8WZ59 177 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 ABHD1Q96SE0 405 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 HRASLSQ9HDD0 168 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 DAZ1Q9NQZ3 744 aaKnown RBP9.32□□□□□ -0.92
SHMT2-223ENST00000556689 BET1LQ9NYM9 111 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 MTFP1Q9UDX5 166 aa9.32□□□□□ -0.92
SHMT2-223ENST00000556689 ELF5Q9UKW6 265 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-223ENST00000556689 OR2T8A6NH00 312 aa9.31□□□□□ -0.92
SHMT2-223ENST00000556689 UPK1BO75841 260 aa9.31□□□□□ -0.92
SHMT2-223ENST00000556689 S1PR2O95136 353 aa9.31□□□□□ -0.92
SHMT2-223ENST00000556689 AKAIN1P0CW23 69 aa9.31□□□□□ -0.92
SHMT2-223ENST00000556689 IL7P13232 177 aa9.31□□□□□ -0.92
SHMT2-223ENST00000556689 CMC4P56277 68 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-223ENST00000556689 APRG1Q8IVJ8 170 aa9.31□□□□□ -0.92
SHMT2-223ENST00000556689 CD300LFQ8TDQ1 290 aa9.31□□□□□ -0.92
SHMT2-223ENST00000556689 BSCL2Q96G97 398 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-223ENST00000556689 SOSTQ9BQB4 213 aa9.31□□□□□ -0.92
SHMT2-223ENST00000556689 C7orf50Q9BRJ6 194 aaKnown RBP9.31□□□□□ -0.92
SHMT2-223ENST00000556689 SRSF8Q9BRL6 282 aaKnown RBP9.31□□□□□ -0.92
SHMT2-223ENST00000556689 IGLC7A0M8Q6 106 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 NAP1L6A6NFF2 107 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 DISC1C4P0D8 188 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 K7EMT4 169 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 NDUFA4O00483 81 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 CTSDP07339 412 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-223ENST00000556689 TSPAN5P62079 268 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 SLC25A24Q6NUK1 477 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 SPSB3Q6PJ21 355 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 HOGA1Q86XE5 327 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 TMEM229BQ8NBD8 167 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 OR11H2Q8NH07 326 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 GPHA2Q96T91 129 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 C20orf24Q9BUV8 137 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 COMMD5Q9GZQ3 224 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 MCUBQ9NWR8 336 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 ANXA10Q9UJ72 324 aa9.3□□□□□ -0.92
SHMT2-223ENST00000556689 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
SHMT2-223ENST00000556689 SSX5O60225 188 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 RAB3DO95716 219 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms