RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 A0A1W2PPI3 338 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 LINC00862A6NCI5 91 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 TMEM238C9JI98 176 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 H0Y980 276 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 ATP6V0E1O15342 81 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 PHF1O43189 567 aaPredicted RBP4.08□□□□□ -1.76
SRP54-211ENST00000556445 MPDU1O75352 247 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 ORM1P02763 201 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 CD55P08174 381 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 SCTP09683 121 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 OR5AC1P0C628 307 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 SLC25A6P12236 298 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 TPT1P13693 172 aaKnown RBP4.08□□□□□ -1.76
SRP54-211ENST00000556445 VDAC1P21796 283 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 CHRNB4P30926 498 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 GNRHRP30968 328 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 IL2RGP31785 369 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 CA7P43166 264 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 HILS1P60008 231 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
SRP54-211ENST00000556445 RPL8P62917 257 aaKnown RBP4.08□□□□□ -1.76
SRP54-211ENST00000556445 TNFAIP6P98066 277 aaPredicted RBP4.08□□□□□ -1.76
SRP54-211ENST00000556445 ARL16Q0P5N6 197 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 CATR1Q13166 79 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 IL15RAQ13261 267 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 OR5I1Q13606 314 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 IGFBP7Q16270 282 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 TAL2Q16559 108 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 FBXL19-AS1Q494R0 122 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 FAM120AOSQ5T036 256 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 PVRIGQ6DKI7 326 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 Q6ZR03 302 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 WDR86Q86TI4 376 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 ZNF695Q8IW36 515 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 C11orf53Q8IXP5 236 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 RPRMLQ8N4K4 120 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 FAM71E2Q8N5Q1 922 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 ZNF114Q8NC26 417 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 LFNGQ8NES3 379 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 LRRC29Q8WV35 223 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 DCUN1D4Q92564 292 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 DYRK2Q92630 601 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 RBPMSQ93062 196 aaKnown RBP4.08□□□□□ -1.76
SRP54-211ENST00000556445 ZNF488Q96MN9 340 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 TMEM56Q96MV1 263 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 AQP10Q96PS8 301 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 CSTL1Q9H114 145 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 PLEKHF2Q9H8W4 249 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 MED9Q9NWA0 146 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 GSKIPQ9P0R6 139 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 ZNF581Q9P0T4 197 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 KCNS2Q9ULS6 477 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 TMEM56-RWDD3S4R434 201 aa4.08□□□□□ -1.76
SRP54-211ENST00000556445 CUL9Q8IWT3 2517 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 APC2O95996 2303 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 SHANK1Q9Y566 2161 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 LAMA1P25391 3075 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 TRGV8A0A0C4DH27 118 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 A0A1B0GU03 582 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 ATP6V1G2-DDX39BF2Z307 99 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 DEDDO75618 318 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 HBE1P02100 147 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 MUC1P15941 1255 aaPredicted RBP4.07□□□□□ -1.76
SRP54-211ENST00000556445 RCC1P18754 421 aaPredicted RBP4.07□□□□□ -1.76
SRP54-211ENST00000556445 F2RP25116 425 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 GABRA2P47869 451 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 TFPI2P48307 235 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 S100A10P60903 97 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 HERPUD1Q15011 391 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 FFAR4Q5NUL3 377 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 PDZD9Q8IXQ8 264 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 ZFP82Q8N141 532 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 ZNF561Q8N587 486 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 STOML3Q8TAV4 291 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 FAM222BQ8WU58 562 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 IL1F10Q8WWZ1 152 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 RNASE6Q93091 150 aaKnown RBP4.07□□□□□ -1.76
SRP54-211ENST00000556445 LSM10Q969L4 123 aaKnown RBP4.07□□□□□ -1.76
SRP54-211ENST00000556445 PTH2Q96A98 100 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 C18orf12Q96KH6 178 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 OR2V2Q96R30 315 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 ZNF471Q9BX82 626 aaPredicted RBP4.07□□□□□ -1.76
SRP54-211ENST00000556445 SLC25A31Q9H0C2 315 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 LIME1Q9H400 295 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 TAF9BQ9HBM6 251 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 CACFD1Q9UGQ2 172 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 PPP1R3CQ9UQK1 317 aa4.07□□□□□ -1.76
SRP54-211ENST00000556445 DNAH14Q0VDD8 3507 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 IGLV5-37A0A075B6J1 123 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 BORCS7-ASMTA0A0B4J1R7 106 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 IGLV9-49A0A0B4J1Y8 123 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 TRAV38-1A0A0B4J264 116 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 IGKV1-6A0A0C4DH72 117 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 TRBV7-9A0A0J9YWB2 115 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 K7EPK0 472 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 K7N7A8 449 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 M0R036 132 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 NDUFA2O43678 99 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 GATCO43716 136 aaKnown RBP4.06□□□□□ -1.76
SRP54-211ENST00000556445 SOX15O60248 233 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms