RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 CD5P06127 495 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 CTSGP08311 255 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 MFAP2P55001 183 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 SCAND1P57086 179 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 HERV-K104P61576 105 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 ZNF124Q15973 351 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 TSPAN14Q8NG11 270 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 VCX3BQ9H321 246 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 OR51B2Q9Y5P1 312 aa11.33□□□□□ -0.6
SUPT16H-205ENST00000556217 F8W735 103 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-205ENST00000556217 F2RP25116 425 aa11.32□□□□□ -0.6
SUPT16H-205ENST00000556217 CBX5P45973 191 aa11.32□□□□□ -0.6
SUPT16H-205ENST00000556217 HSPA13P48723 471 aa11.32□□□□□ -0.6
SUPT16H-205ENST00000556217 CADM3Q8N126 398 aa11.32□□□□□ -0.6
SUPT16H-205ENST00000556217 OR5AP2Q8NGF4 316 aa11.32□□□□□ -0.6
SUPT16H-205ENST00000556217 OR10C1Q96KK4 312 aa11.32□□□□□ -0.6
SUPT16H-205ENST00000556217 CNBD2Q96M20 576 aa11.32□□□□□ -0.6
SUPT16H-205ENST00000556217 SSR3Q9UNL2 185 aa11.32□□□□□ -0.6
SUPT16H-205ENST00000556217 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 IGKV3-7A0A075B6H7 116 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 TRAV14DV4A0A0A6YYC5 116 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 C11orf94C9JXX5 98 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 CA1P00915 261 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 KRASP01116 189 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 RLN1P04808 185 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 EIF4EP06730 217 aaKnown RBP11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 PRR20EP86478 221 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 PRR20CP86479 221 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 PRR20DP86480 221 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 PRR20BP86481 221 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 PRR20AP86496 221 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 TMEM187Q14656 261 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 OR1P1Q8NH06 330 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 TXN2Q99757 166 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 DIABLOQ9NR28 239 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 PRNDQ9UKY0 176 aa11.31□□□□□ -0.6
SUPT16H-205ENST00000556217 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 FCER2P06734 321 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 PSMB9P28065 219 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 GNRHRP30968 328 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 LPAR6P43657 344 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 MFAP4P55083 255 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 UBE2UQ5VVX9 321 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 GBGT1Q8N5D6 347 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 DGCR14Q96DF8 476 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 TSC22D3Q99576 134 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 GINS3Q9BRX5 216 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 AUNIPQ9H7T9 357 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 IFT46Q9NQC8 304 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 DNAH6Q9C0G6 4158 aa11.3□□□□□ -0.6
SUPT16H-205ENST00000556217 IGLL5B9A064 214 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 DEFB4AO15263 64 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 DFFBO76075 338 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 SDC2P34741 201 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 G6PCP35575 357 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 GABARAPL2P60520 117 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 FAM90A2PQ658T7 463 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 TCF24Q7RTU0 167 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 CENPSQ8N2Z9 138 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 FCAMRQ8WWV6 532 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 FCGR1BQ92637 280 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 SLC25A46Q96AG3 418 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 SLC25A38Q96DW6 304 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 NXF2Q9GZY0 626 aaKnown RBP11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 EHFQ9NZC4 300 aa11.29□□□□□ -0.6
SUPT16H-205ENST00000556217 C15orf61A6NNL5 157 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 PGLYRP1O75594 196 aaPredicted RBP11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 MXD1Q05195 221 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 IDNKQ5T6J7 187 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 DHRS11Q6UWP2 260 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 IZUMO2Q6UXV1 221 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 OR5H6Q8NGV6 325 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 HRH4Q9H3N8 390 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 TMEM14BQ9NUH8 114 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 APLNQ9ULZ1 77 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 PKHD1P08F94 4074 aa11.28□□□□□ -0.6
SUPT16H-205ENST00000556217 IGHV3OR16-13A0A075B7E8 117 aa11.27□□□□□ -0.61
SUPT16H-205ENST00000556217 IGHV3-74A0A0B4J1X5 117 aa11.27□□□□□ -0.61
SUPT16H-205ENST00000556217 I3L2K1 104 aa11.27□□□□□ -0.61
SUPT16H-205ENST00000556217 GNG7O60262 68 aa11.27□□□□□ -0.61
SUPT16H-205ENST00000556217 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.61
SUPT16H-205ENST00000556217 LINC00336Q6ZUF6 198 aa11.27□□□□□ -0.61
SUPT16H-205ENST00000556217 MOB3AQ96BX8 217 aa11.27□□□□□ -0.61
SUPT16H-205ENST00000556217 ZNF2Q9BSG1 426 aaPredicted RBP11.27□□□□□ -0.61
SUPT16H-205ENST00000556217 ABCA13Q86UQ4 5058 aa11.27□□□□□ -0.61
SUPT16H-205ENST00000556217 TRAV2A0A0B4J234 112 aa11.26□□□□□ -0.61
SUPT16H-205ENST00000556217 MEIS3P1A6NDR6 274 aa11.26□□□□□ -0.61
SUPT16H-205ENST00000556217 ANKRD65E5RJM6 399 aa11.26□□□□□ -0.61
SUPT16H-205ENST00000556217 ST8SIA3O43173 380 aa11.26□□□□□ -0.61
SUPT16H-205ENST00000556217 MT-CO2P00403 227 aa11.26□□□□□ -0.61
SUPT16H-205ENST00000556217 S100GP29377 79 aa11.26□□□□□ -0.61
SUPT16H-205ENST00000556217 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms