RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 A0A075B6Q4 140 aa6.85□□□□□ -1.31
SCFD1-215ENST00000555259 APOHP02749 345 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-215ENST00000555259 EIF4EP06730 217 aaKnown RBP6.85□□□□□ -1.31
SCFD1-215ENST00000555259 HIST1H1DP16402 221 aaKnown RBP6.85□□□□□ -1.31
SCFD1-215ENST00000555259 TALDO1P37837 337 aa6.85□□□□□ -1.31
SCFD1-215ENST00000555259 THOC7Q6I9Y2 204 aaKnown RBP6.85□□□□□ -1.31
SCFD1-215ENST00000555259 ZNF773Q6PK81 442 aa6.85□□□□□ -1.31
SCFD1-215ENST00000555259 ZNF66Q6ZN08 573 aa6.85□□□□□ -1.31
SCFD1-215ENST00000555259 HSD17B13Q7Z5P4 300 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-215ENST00000555259 DUSP18Q8NEJ0 188 aa6.85□□□□□ -1.31
SCFD1-215ENST00000555259 ZNF555Q8NEP9 628 aa6.85□□□□□ -1.31
SCFD1-215ENST00000555259 RABAC1Q9UI14 185 aa6.85□□□□□ -1.31
SCFD1-215ENST00000555259 AK6Q9Y3D8 172 aaKnown RBP6.85□□□□□ -1.31
SCFD1-215ENST00000555259 IGHV3-66A0A0C4DH42 116 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 NBDYA0A0U1RRE5 68 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 TMEM272A0A1B0GTI8 110 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 FGF2P09038 288 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 SPART-AS1P0CW21 52 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 TRAPPC2P0DI81 140 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 TRAPPC2BP0DI82 140 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 FAM3BP58499 235 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-215ENST00000555259 TAS2R31P59538 309 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 POU2AF1Q16633 256 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 ACTL10Q5JWF8 245 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 SPAG16Q8N0X2 631 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 NANOGP1Q8N7R0 232 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 OR10R2Q8NGX6 335 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 GINS3Q9BRX5 216 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 NXF2Q9GZY0 626 aaKnown RBP6.84□□□□□ -1.31
SCFD1-215ENST00000555259 TMEM140Q9NV12 185 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 RAB22AQ9UL26 194 aa6.84□□□□□ -1.31
SCFD1-215ENST00000555259 TEX50A0A1B0GTY4 177 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 TNFSF12O43508 249 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 CIB2O75838 187 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 CTXN2P0C2S0 81 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 ZNF688P0C7X2 276 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 NQO2P16083 231 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 GADD45AP24522 165 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 EMP1P54849 157 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 LSM10Q969L4 123 aaKnown RBP6.83□□□□□ -1.32
SCFD1-215ENST00000555259 GRAMD2BQ96HH9 432 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 YTHDF1Q9BYJ9 559 aaKnown RBP6.83□□□□□ -1.32
SCFD1-215ENST00000555259 ELF5Q9UKW6 265 aaPredicted RBP6.83□□□□□ -1.32
SCFD1-215ENST00000555259 TMED3Q9Y3Q3 217 aa6.83□□□□□ -1.32
SCFD1-215ENST00000555259 ERICH4A6NGS2 130 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 K7EQG2 157 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 RBFOX2O43251 390 aaKnown RBP eCLIP6.82□□□□□ -1.32
SCFD1-215ENST00000555259 DTYMKP23919 212 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 KRTAP10-2P60368 255 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 TOMM20LQ6UXN7 152 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 OR1L8Q8NGR8 309 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 SLC25A46Q96AG3 418 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 DCSTAMPQ9H295 470 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 NDUFA4L2Q9NRX3 87 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 XCL2Q9UBD3 114 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 SULT1C2O00338 296 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 HPRT1P00492 218 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 HTN3P15516 51 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 RASSF2P50749 326 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 MFAP4P55083 255 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 ZFP1Q6P2D0 407 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 TMEM88Q6PEY1 159 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 AHSA2Q719I0 299 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 DMBX1Q8NFW5 382 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 STXBP6Q8NFX7 210 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 ZNRF2Q8NHG8 242 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 TMEM203Q969S6 136 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 TXN2Q99757 166 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 NIPSNAP3BQ9BS92 247 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 HINT2Q9BX68 163 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 C1QTNF4Q9BXJ3 329 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 DKK2Q9UBU2 259 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 PSORS1C1Q9UIG5 152 aa6.82□□□□□ -1.32
SCFD1-215ENST00000555259 TMEM189A5PLL7 270 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 I3L2K1 104 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 IGHV3-48P01763 117 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 RCN1Q15293 331 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 HES5Q5TA89 166 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 CNIH2Q6PI25 160 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 ZNF705AQ6ZN79 300 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-215ENST00000555259 TMEM91Q6ZNR0 172 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 OR1P1Q8NH06 330 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 DCANP1Q8TF63 244 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 C18orf15Q96N68 181 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 NEU1Q99519 415 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 ATG101Q9BSB4 218 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 TMEM231Q9H6L2 316 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 CCL28Q9NRJ3 127 aa6.81□□□□□ -1.32
SCFD1-215ENST00000555259 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 TEX48A0A1B0GUV7 120 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 ZNF705FA8MVS1 300 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-215ENST00000555259 GNG7O60262 68 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 ZNF705DP0CH99 300 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-215ENST00000555259 ZNF705BP0CI00 300 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-215ENST00000555259 FGF9P31371 208 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-215ENST00000555259 RANBP1P43487 201 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 NUTF2P61970 127 aaKnown RBP6.8□□□□□ -1.32
SCFD1-215ENST00000555259 MSMO1Q15800 293 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 FAM222AQ5U5X8 452 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 Q5VSD8 79 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms