RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SSBP4Q9BWG4 385 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 ANAPC10Q9UM13 185 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 KCNK7Q9Y2U2 307 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 DENND4AQ7Z401 1863 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 LINC00614P0C842 121 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 SELENOHQ8IZQ5 122 aaKnown RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 SBF1O95248 1867 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 WDR81Q562E7 1941 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 A0A0J9YW62 118 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 FGF9P31371 208 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 FGF12P61328 243 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 SDHCQ99643 169 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 ANAPC13Q9BS18 74 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 RPP21Q9H633 154 aaKnown RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF703Q9H7S9 590 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 PTPRFP10586 1907 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 ZG16O60844 167 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 IGHV3-53P01767 116 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 GPR146Q96CH1 333 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 DTX4Q9Y2E6 619 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 RREB1Q92766 1687 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 PGLYRP1O75594 196 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 ANXA2RQ3ZCQ2 193 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 C3orf56Q8N813 242 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 TAF15Q92804 592 aaKnown RBP eCLIP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 METRNQ9UJH8 293 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 A0A087WX48 190 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 NDUFA2O43678 99 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 GALP22466 123 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 TMEM252Q8N6L7 170 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 WDFY2Q96P53 400 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 H0YL77 283 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 KLF4O43474 513 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 TMEM155Q4W5P6 130 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 DNM1P46Q6ZS02 220 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 PEF1Q9UBV8 284 aaKnown RBP5.85□□□□□ -1.47
SYNE2-216ENST00000555002 ALS2Q96Q42 1657 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 SRSF6Q13247 344 aaKnown RBP5.85□□□□□ -1.47
SYNE2-216ENST00000555002 C9orf62Q8N4C0 152 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 RPRMQ9NS64 109 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 PRR14LQ5THK1 2151 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-216ENST00000555002 IGLV3-25P01717 112 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF146Q15072 292 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF114Q8NC26 417 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 OR11H7Q8NGC8 314 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 PAPPAQ13219 1627 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 HBDP02042 147 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 IFI27P40305 119 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-216ENST00000555002 GNG5P63218 68 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 PSMG4Q5JS54 123 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 EREGO14944 169 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 SCAND1P57086 179 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 HSPE1P61604 102 aaKnown RBP5.85□□□□□ -1.47
SYNE2-216ENST00000555002 VAX1Q5SQQ9 334 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 MRPL32Q9BYC8 188 aaKnown RBP5.85□□□□□ -1.47
SYNE2-216ENST00000555002 FXYD1O00168 92 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 MSRB3Q8IXL7 192 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 ORAOV1Q8WV07 137 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 ZIC1Q15915 447 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 MTURNQ8N3F0 131 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 TMEM186Q96B77 213 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 PRADC1Q9BSG0 188 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 MARVELD1Q9BSK0 173 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 DERL1Q9BUN8 251 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 TCRBV5S1A1TA0A578 114 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 GCM2O75603 506 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-216ENST00000555002 LINC00299Q6ZSB3 139 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 COX11Q9Y6N1 276 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF729A6NN14 1252 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-216ENST00000555002 GHRHP01286 108 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 GTF3AQ92664 365 aaKnown RBP5.85□□□□□ -1.47
SYNE2-216ENST00000555002 G6PC2Q9NQR9 355 aa5.85□□□□□ -1.47
SYNE2-216ENST00000555002 NAPSAO96009 420 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 FAM201AQ5SY85 155 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 ZNRF1Q8ND25 227 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 FAM57AQ8TBR7 257 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 ELOVL5Q9NYP7 299 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF250P15622 560 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 HS3ST3B1Q9Y662 390 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 AGAP20933 346 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 CD24P25063 80 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 EGR4Q05215 589 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF585BQ52M93 769 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 FGFRL1Q8N441 504 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 CSPG4Q6UVK1 2322 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 VWC2LB2RUY7 222 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 LHX2P50458 406 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 XAF1Q6GPH4 301 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 COX14Q96I36 57 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 BCORQ6W2J9 1755 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 M0R2P5 195 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 TFF3Q07654 80 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 FER1L6-AS1Q8NA97 138 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 GPR132Q9UNW8 380 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 TRGV1A0A0A0MS02 117 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 SP9P0CG40 484 aa5.84□□□□□ -1.47
SYNE2-216ENST00000555002 ELF5Q9UKW6 265 aaPredicted RBP5.84□□□□□ -1.47
SYNE2-216ENST00000555002 MSGN1A6NI15 193 aa5.84□□□□□ -1.48
SYNE2-216ENST00000555002 SLC17A3O00476 420 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms