RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CCL20P78556 96 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 SERF2P84101 59 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 KLRD1Q13241 179 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 C2orf83Q53S99 150 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 ARSJQ5FYB0 599 aaPredicted RBP7.14□□□□□ -1.27
TDP1-210ENST00000554976 VMO1Q7Z5L0 202 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 C1QL4Q86Z23 238 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 OR10P1Q8NGE3 313 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 MBD3L1Q8WWY6 194 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 NPCDR1Q9BY65 106 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 GOLT1BQ9Y3E0 138 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 AMMECR1Q9Y4X0 333 aaPredicted RBP7.14□□□□□ -1.27
TDP1-210ENST00000554976 CA2P00918 260 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 TREML4Q6UXN2 200 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 DYNAPQ8N1N2 210 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 TEX45Q8NA69 505 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 SLC24A4Q8NFF2 622 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 OR1L8Q8NGR8 309 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 C10orf105Q8TEF2 133 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 TBX15Q96SF7 602 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 ZNF430Q9H8G1 570 aaPredicted RBP7.14□□□□□ -1.27
TDP1-210ENST00000554976 GAR1Q9NY12 217 aaKnown RBP7.14□□□□□ -1.27
TDP1-210ENST00000554976 FKBP11Q9NYL4 201 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 FBN2P35556 2912 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 IFNA5P01569 189 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 LGALS7P47929 136 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 CAMLGP49069 296 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 RPS16P62249 146 aaKnown RBP7.14□□□□□ -1.27
TDP1-210ENST00000554976 ARF6P62330 175 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 USF2Q15853 346 aaPredicted RBP7.14□□□□□ -1.27
TDP1-210ENST00000554976 TMEM41BQ5BJD5 291 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 Q8N6K4 173 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 ZNF114Q8NC26 417 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 NDUFAF3Q9BU61 184 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 UQCC1Q9NVA1 299 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 A0A096LNT2 108 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 IFITM10A6NMD0 228 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 DLEU1O43261 78 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 NDUFA3O95167 84 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 RPL8P62917 257 aaKnown RBP7.13□□□□□ -1.27
TDP1-210ENST00000554976 WT1-ASQ06250 92 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 PMS2P11Q13670 270 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 GAMTQ14353 236 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 PSG5Q15238 335 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 MAJINQ3KP22 176 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 C16orf54Q6UWD8 224 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 NPBQ8NG41 125 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 OR10W1Q8NGF6 305 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 CCL19Q99731 98 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 MGST2Q99735 147 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 RNF5Q99942 180 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 RPRMQ9NS64 109 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 FAM96BQ9Y3D0 163 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 ARHGAP32A7KAX9 2087 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 hCG_1809904A0A1W2PP81 198 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 A0A1W2PPE2 198 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 A0A1W2PR64 198 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 A0A1W2PRV1 198 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 ENSAO43768 121 aaKnown RBP7.13□□□□□ -1.27
TDP1-210ENST00000554976 VENTXO95231 258 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 COX7A1P24310 79 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 CD1BP29016 333 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 DVL1P1P54792 670 aaPredicted RBP7.13□□□□□ -1.27
TDP1-210ENST00000554976 AKR1C1Q04828 323 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 EBI3Q14213 229 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 LHFPL4Q7Z7J7 247 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 VSTM2AQ8TAG5 236 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 FAM213BQ8TBF2 198 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 NOL4LQ96MY1 436 aaPredicted RBP7.13□□□□□ -1.27
TDP1-210ENST00000554976 CLCC1Q96S66 551 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 FBXO7Q9Y3I1 522 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 ROS1P08922 2347 aa7.13□□□□□ -1.27
TDP1-210ENST00000554976 NBPF19A0A087WUL8 3843 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 IGLC7A0M8Q6 106 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 RAB5AP20339 215 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 NPY1RP25929 384 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 PDLIM4P50479 330 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 ATP5IP56385 69 aaPredicted RBP7.12□□□□□ -1.27
TDP1-210ENST00000554976 CLEC2AQ6UVW9 174 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 RPP25LQ8N5L8 163 aaKnown RBP7.12□□□□□ -1.27
TDP1-210ENST00000554976 OR5R1Q8NH85 324 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 TMEM231Q9H6L2 316 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 IGHV3-72A0A0B4J1Y9 119 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 TEX22C9J3V5 150 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 RBMXL2O75526 392 aaKnown RBP7.12□□□□□ -1.27
TDP1-210ENST00000554976 YIF1AO95070 293 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 FGF7P21781 194 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 PRSS8Q16651 343 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 RCC1LQ96I51 464 aaKnown RBP7.12□□□□□ -1.27
TDP1-210ENST00000554976 HEYLQ9NQ87 328 aaPredicted RBP7.12□□□□□ -1.27
TDP1-210ENST00000554976 SIGLEC9Q9Y336 463 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 CSMD2Q7Z408 3487 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 MALRD1Q5VYJ5 2156 aa7.12□□□□□ -1.27
TDP1-210ENST00000554976 A8MWP6 167 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 SEC14L6B5MCN3 397 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 NDUFS8O00217 210 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 MAS1LP35410 378 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 C10orf55Q5SWW7 151 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 SCGB1C1Q8TD33 95 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 PLEKHA3Q9HB20 300 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms