RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GAGE12BA1L429 117 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 IFITM10A6NMD0 228 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 C15orf61A6NNL5 157 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 PLA2G10O15496 165 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 TRAF3IP2O43734 574 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 MOSP00540 346 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 HLA-DQA2P01906 255 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 FGF2P09038 288 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 LINC00694P0DN24 101 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 COX5AP20674 150 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 BLVRBP30043 206 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 IL2RGP31785 369 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 SSR2P43308 183 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 DLX1P56177 255 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 PEA15Q15121 130 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 HIST3H3Q16695 136 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM69Q5SWH9 247 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 ASPHD1Q5U4P2 390 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 GGNBP1Q5YKI7 109 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 KDM4DQ6B0I6 523 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 NOXRED1Q6NXP6 359 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 CNIH2Q6PI25 160 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 C16orf82Q7Z2V1 217 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 COX8CQ7Z4L0 72 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 MRPL55Q7Z7F7 128 aaKnown RBP2.2□□□□□ -2.06
PRPF39-206ENST00000554429 OR10AD1Q8NGE0 317 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 OR8D4Q8NGM9 314 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 OR2G3Q8NGZ4 309 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 ZNRF2Q8NHG8 242 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 THAP6Q8TBB0 222 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 TMED6Q8WW62 240 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 MLST8Q9BVC4 326 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 PBDC1Q9BVG4 233 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 OR2H1Q9GZK4 316 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 MED9Q9NWA0 146 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 NAT8BQ9UHF3 227 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 PROCRQ9UNN8 238 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 TACC2O95359 2948 aa2.2□□□□□ -2.06
PRPF39-206ENST00000554429 IGHV2OR16-5A0A0B4J2B6 119 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 GAGE12HA6NDE8 117 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF724A8MTY0 619 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 F6UB75 175 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 MYL12BO14950 172 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SYNGR1O43759 233 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 REM1O75628 298 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 MT-ND4LP03901 98 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 GZMBP10144 247 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ORM2P19652 201 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 RPS27P42677 84 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 THBS3P49746 956 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF83P51522 516 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF84P51523 738 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 HSPE1P61604 102 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 RHOGP84095 191 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 POU3F1Q03052 451 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SRSF4Q08170 494 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 HSD52Q0P140 79 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 UNC119Q13432 240 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 KIAA0040Q15053 153 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 CLEC12BQ2HXU8 276 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 IAH1Q2TAA2 248 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ANXA2RQ3ZCQ2 193 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 RPL22L1Q6P5R6 122 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 GOLT1AQ6ZVE7 132 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SAMD12Q8N8I0 201 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ZDHHC22Q8N966 263 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 AGMATQ9BSE5 352 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 PLA2G12AQ9BZM1 189 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM222Q9H0R3 208 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 MEPEQ9NQ76 525 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 MRPL27Q9P0M9 148 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 VDAC3Q9Y277 283 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 V9GYH0 126 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 IGKV3D-15A0A087WSY6 115 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 A0A0U1RQV1 116 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 OR5B21A6NL26 309 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF705GA8MUZ8 300 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 FAM90A26D6RGX4 464 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 CCDC179H3BU77 68 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 H7C1H1 209 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 DHRS3O75911 302 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 P01737 135 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 IGHV4-39P01824 125 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 HBZP02008 142 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 GKN3PP0CG01 181 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 PSG2P11465 335 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SRIP30626 198 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 GPR183P32249 361 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 RPL27P61353 136 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 FABP5Q01469 135 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 MEF2BQ02080 365 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SLC38A11Q08AI6 406 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 STAC2Q6ZMT1 411 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 NEGR1Q7Z3B1 354 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 GAPTQ8N292 157 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 GBGT1Q8N5D6 347 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 OR4K5Q8NGD3 323 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 OR52E2Q8NGJ4 325 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms